Project measure / variable:   Chesler2   hematocrit

ID, description, units MPD:43427   hematocrit   hematocrit (HCT)   [%]  
Data set, strains Chesler2   CC diallel w/par   49 strains     sex: both     age: 7-15wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Chesler2 - hematocrit (HCT)



  8-WAY DIALLEL CROSS VIEW
Female animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ 46.7 55.5 53.5 51.0 — — 63.2 —
A ♀ — 40.6 53.4 — — 48.8 — —
B6 ♀ 49.7 44.1 51.2 — 49.2 48.7 55.3 —
CAST ♀ — 57.5 55.2 52.1 — 51.5 56.4 52.1
NOD ♀ — 51.2 49.8 — 35.1 48.5 — —
NZO ♀ 52.3 48.7 — — — — — 51.2
PWK ♀ 54.2 57.5 — — 55.5 — 45.9 —
WSB ♀ 55.7 55.3 51.7 — 52.4 43.1 51.8 50.4

Male animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ 45.5 53.3 51.8 — 53.0 50.9 — —
A ♀ — 42.2 46.5 — 47.2 — 57.5 53.6
B6 ♀ — 48.2 50.5 — 48.6 50.9 — —
CAST ♀ 54.0 54.0 54.4 55.7 53.0 45.5 58.4 —
NOD ♀ — — — — 40.5 49.1 — —
NZO ♀ — — 51.0 — 20.2 47.5 — —
PWK ♀ — 56.5 — — — — 46.8 —
WSB ♀ — 53.4 52.9 56.6 50.7 41.3 — 55.9

Cell coloring is based on strain mean Z-scores.     High-end         Mid         Low-end           Mouse over the cells to see additional info.


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested38 strains34 strains
Mean of the strain means51.2   % 49.9   %
Median of the strain means51.6   % 51.0   %
SD of the strain means± 5.07 ± 6.96
Coefficient of variation (CV)0.0990 0.139
Min–max range of strain means35.1   –   63.2   % 20.2   –   58.4   %
Mean sample size per strain1.9   mice 2.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2.8061 2.8061 0.1728 0.6785
strain 10 2860.6234 286.0623 17.618 < 0.0001
sex:strain 10 95.7256 9.5726 0.5896 0.8191
Residuals 100 1623.6948 16.2369


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 46.7 1.05   2   0.745 0.0226 45.9, 47.4 -0.89
129S1/SvImJ m 45.5 0.332   2   0.235 0.0073 45.3, 45.7 -0.63
129SAF1 f 55.5 0.0   1   0.0 0.0 55.5, 55.5 0.85
129SAF1 m 53.3 0.361   2   0.255 0.00677 53.0, 53.5 0.49
129SB6F1 f 53.5 2.44   2   1.73 0.0456 51.8, 55.2 0.45
129SB6F1 m 51.8 0.552   2   0.39 0.0106 51.5, 52.2 0.27
129SCASTF1 f 51.0 2.31   2   1.63 0.0452 49.4, 52.6 -0.04
129SNODF1 m 53.0 2.66   2   1.88 0.0501 51.2, 54.9 0.44
129SNZOF1 m 50.9 1.85   2   1.31 0.0364 49.6, 52.2 0.14
129SPWKF1 f 63.2 0.0   1   0.0 0.0 63.2, 63.2 2.36
AB6F1 f 53.4 0.0   1   0.0 0.0 53.4, 53.4 0.43
AB6F1 m 46.5 2.28   4 1.14 0.0492 43.5, 48.9 -0.49
A/J f 40.6 2.04   2   1.44 0.0502 39.1, 42.0 -2.09
A/J m 42.2 4.12   6 1.68 0.0978 37.0, 47.8 -1.11
ANODF1 m 47.2 3.43   7 1.3 0.0726 41.6, 51.7 -0.39
ANZOF1 f 48.8 0.0   1   0.0 0.0 48.8, 48.8 -0.48
APWKF1 m 57.5 0.0   1   0.0 0.0 57.5, 57.5 1.09
AWSBF1 m 53.6 0.0   1   0.0 0.0 53.6, 53.6 0.53
B6129SF1/J f 49.7 2.7   2   1.91 0.0543 47.8, 51.6 -0.3
B6AF1/J f 44.1 0.0   1   0.0 0.0 44.1, 44.1 -1.4
B6AF1/J m 48.2 0.0   1   0.0 0.0 48.2, 48.2 -0.25
B6NODF1 f 49.2 0.0   1   0.0 0.0 49.2, 49.2 -0.4
B6NODF1 m 48.6 0.106   2   0.075 0.00218 48.5, 48.7 -0.19
B6NZOF1 f 48.7 0.0   1   0.0 0.0 48.7, 48.7 -0.5
B6NZOF1 m 50.9 0.0   1   0.0 0.0 50.9, 50.9 0.14
B6PWKF1 f 55.3 0.0   1   0.0 0.0 55.3, 55.3 0.81
C57BL/6J f 51.2 3.19   20 0.714 0.0624 44.8, 54.6 0.0
C57BL/6J m 50.5 2.45   37 0.403 0.0486 44.8, 54.9 0.08
CAST129SF1 m 54.0 1.39   2   0.985 0.0258 53.0, 55.0 0.59
CASTAF1 f 57.5 0.0   1   0.0 0.0 57.5, 57.5 1.24
CASTAF1 m 54.0 2.33   2   1.65 0.0432 52.4, 55.7 0.59
CASTB6F1 f 55.2 0.0   1   0.0 0.0 55.2, 55.2 0.79
CASTB6F1 m 54.4 2.58   3 1.49 0.0474 51.5, 56.3 0.64
CAST/EiJ f 52.1 0.928   5 0.415 0.0178 51.0, 53.2 0.18
CAST/EiJ m 55.7 1.2   2   0.85 0.0216 54.9, 56.6 0.83
CASTNODF1 m 53.0 0.0   1   0.0 0.0 53.0, 53.0 0.44
CASTNZOF1 f 51.5 3.83   4 1.91 0.0743 46.9, 55.6 0.06
CASTNZOF1 m 45.5 0.0   1   0.0 0.0 45.5, 45.5 -0.63
CASTPWKF1 f 56.4 2.04   5 0.913 0.0362 53.7, 59.3 1.02
CASTPWKF1 m 58.4 1.82   6 0.743 0.0312 55.8, 60.5 1.22
CASTWSBF1 f 52.1 4.86   2   3.44 0.0933 48.7, 55.6 0.18
NODAF1 f 51.2 0.0   1   0.0 0.0 51.2, 51.2 0.0
NODB6F1 f 49.8 1.23   3 0.709 0.0247 49.0, 51.2 -0.28
NODNZOF1 f 48.5 1.85   2   1.31 0.0382 47.1, 49.8 -0.53
NODNZOF1 m 49.1 2.62   2   1.85 0.0533 47.2, 50.9 -0.12
NOD/ShiLtJ f 35.1 3.98   3 2.3 0.113 31.1, 39.0 -3.18
NOD/ShiLtJ m 40.5 1.21   3 0.696 0.0297 39.1, 41.3 -1.35
NZO129SF1 f 52.3 0.0   1   0.0 0.0 52.3, 52.3 0.21
NZOAF1 f 48.7 0.0   1   0.0 0.0 48.7, 48.7 -0.5
NZOB6F1 m 51.0 0.0   1   0.0 0.0 51.0, 51.0 0.16
NZO/HlLtJ m 47.5 0.0   1   0.0 0.0 47.5, 47.5 -0.35
NZONODF1 m 20.2 0.0   1   0.0 0.0 20.2, 20.2 -4.27
NZOWSBF1 f 51.2 0.539   3 0.311 0.0105 50.6, 51.6 0.0
PWK129SF1 f 54.2 0.0   1   0.0 0.0 54.2, 54.2 0.59
PWKAF1 f 57.5 0.0   1   0.0 0.0 57.5, 57.5 1.24
PWKAF1 m 56.5 0.0   1   0.0 0.0 56.5, 56.5 0.95
PWKNODF1 f 55.5 0.0   1   0.0 0.0 55.5, 55.5 0.85
PWK/PhJ f 45.9 2.86   2   2.02 0.0623 43.9, 48.0 -1.05
PWK/PhJ m 46.8 4.19   4 2.09 0.0895 43.6, 53.0 -0.45
WSB129SF1 f 55.7 0.0   1   0.0 0.0 55.7, 55.7 0.89
WSBAF1 f 55.3 0.0   1   0.0 0.0 55.3, 55.3 0.81
WSBAF1 m 53.4 0.255   2   0.18 0.00477 53.2, 53.5 0.5
WSBB6F1 f 51.7 1.41   2   1.0 0.0274 50.7, 52.7 0.1
WSBB6F1 m 52.9 1.71   3 0.989 0.0324 51.3, 54.7 0.43
WSBCASTF1 m 56.6 2.88   3 1.66 0.0508 54.2, 59.8 0.96
WSB/EiJ f 50.4 0.827   2   0.585 0.0164 49.9, 51.0 -0.16
WSB/EiJ m 55.9 0.0   1   0.0 0.0 55.9, 55.9 0.86
WSBNODF1 f 52.4 0.0   1   0.0 0.0 52.4, 52.4 0.23
WSBNODF1 m 50.7 0.0495   2   0.035 0.000976 50.7, 50.8 0.11
WSBNZOF1 f 43.1 9.48   6 3.87 0.22 25.7, 52.2 -1.6
WSBNZOF1 m 41.3 13.1   4 6.56 0.318 21.8, 50.5 -1.24
WSBPWKF1 f 51.8 5.56   2   3.93 0.107 47.9, 55.7 0.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 46.685 2.8493 52.3379 41.0321
129S1/SvImJ m 45.505 2.8493 51.1579 39.8521
129SB6F1 f 53.505 2.8493 59.1579 47.8521
129SB6F1 m 51.84 2.8493 57.4929 46.1871
A/J f 40.56 2.8493 46.2129 34.9071
A/J m 42.1517 1.645 45.4154 38.888
C57BL/6J f 51.1595 0.901 52.9471 49.3719
C57BL/6J m 50.4643 0.6624 51.7786 49.15
CAST/EiJ f 52.114 1.8021 55.6892 48.5388
CAST/EiJ m 55.73 2.8493 61.3829 50.0771
CASTPWKF1 f 56.43 1.8021 60.0052 52.8548
CASTPWKF1 m 58.35 1.645 61.6137 55.0863
NODNZOF1 f 48.45 2.8493 54.1029 42.7971
NODNZOF1 m 49.08 2.8493 54.7329 43.4271
NOD/ShiLtJ f 35.1367 2.3264 39.7523 30.5211
NOD/ShiLtJ m 40.5267 2.3264 45.1423 35.9111
PWK/PhJ f 45.935 2.8493 51.5879 40.2821
PWK/PhJ m 46.8125 2.0148 50.8097 42.8153
WSBB6F1 f 51.66 2.8493 57.3129 46.0071
WSBB6F1 m 52.9 2.3264 57.5156 48.2844
WSBNZOF1 f 43.0917 1.645 46.3554 39.828
WSBNZOF1 m 41.2525 2.0148 45.2497 37.2553


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 46.095 2.0148 50.0922 42.0978
129SB6F1 both 52.6725 2.0148 56.6697 48.6753
A/J both 41.3558 1.645 44.6195 38.0921
C57BL/6J both 50.8119 0.5592 51.9213 49.7025
CAST/EiJ both 53.922 1.6857 57.2663 50.5777
CASTPWKF1 both 57.39 1.22 59.8104 54.9696
NODNZOF1 both 48.765 2.0148 52.7622 44.7678
NOD/ShiLtJ both 37.8317 1.645 41.0954 34.568
PWK/PhJ both 46.3737 1.7448 49.8354 42.9121
WSBB6F1 both 52.28 1.8392 55.9289 48.6311
WSBNZOF1 both 42.1721 1.3005 44.7523 39.5919




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA