Project measure / variable:   Donahue3   episodes_horiz

ID, description, units MPD:37702   episodes_horiz   number of discrete horizontal episodes, 10 min test   [n]  
Data set, strains Donahue3   B6.A consomic w/par   22 strains     sex: both     age: 6-7wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Donahue3 - number of discrete horizontal episodes, 10 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested22 strains22 strains
Mean of the strain means139   n 143   n
Median of the strain means144   n 146   n
SD of the strain means± 23.4 ± 22.6
Coefficient of variation (CV)0.169 0.158
Min–max range of strain means38.5   –   154   n 44.0   –   157   n
Mean sample size per strain8.0   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1416.0114 1416.0114 9.7202 0.002
strain 21 173822.1477 8277.2451 56.8192 < 0.0001
sex:strain 21 3946.2386 187.9161 1.29 0.1792
Residuals 308 44868.5 145.6769


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 38.5 24.0   8 8.47 0.622 2.0, 72.0 -4.28
A/J m 44.0 19.3   8 6.81 0.438 24.0, 80.0 -4.37
B6.A-Chr1 f 141.0 20.0   8 7.09 0.142 100.0, 163.0 0.1
B6.A-Chr1 m 153.0 10.6   8 3.73 0.0691 133.0, 166.0 0.45
B6.A-Chr10 f 122.0 16.7   8 5.9 0.136 91.0, 147.0 -0.71
B6.A-Chr10 m 140.0 8.83   8 3.12 0.0629 129.0, 151.0 -0.12
B6.A-Chr11 f 145.0 10.9   8 3.87 0.0756 125.0, 163.0 0.27
B6.A-Chr11 m 147.0 5.66   8 2.0 0.0386 140.0, 156.0 0.19
B6.A-Chr12 f 133.0 10.8   8 3.83 0.0816 115.0, 146.0 -0.24
B6.A-Chr12 m 142.0 8.6   8 3.04 0.0604 132.0, 155.0 -0.03
B6.A-Chr13 f 144.0 8.35   8 2.95 0.0579 135.0, 159.0 0.23
B6.A-Chr13 m 149.0 7.8   8 2.76 0.0522 140.0, 163.0 0.28
B6.A-Chr14 f 150.0 11.5   8 4.08 0.0769 136.0, 169.0 0.48
B6.A-Chr14 m 155.0 6.61   8 2.34 0.0427 147.0, 168.0 0.54
B6.A-Chr15 f 143.0 12.6   8 4.46 0.0881 131.0, 164.0 0.18
B6.A-Chr15 m 147.0 6.58   8 2.33 0.0448 140.0, 159.0 0.19
B6.A-Chr16 f 148.0 12.3   8 4.36 0.0831 136.0, 169.0 0.4
B6.A-Chr16 m 144.0 11.5   8 4.05 0.0794 129.0, 164.0 0.06
B6.A-Chr17 f 154.0 10.7   8 3.77 0.0692 130.0, 163.0 0.65
B6.A-Chr17 m 157.0 9.8   8 3.46 0.0624 146.0, 174.0 0.63
B6.A-Chr18 f 143.0 8.14   8 2.88 0.057 130.0, 152.0 0.18
B6.A-Chr18 m 146.0 10.8   8 3.84 0.0743 132.0, 167.0 0.14
B6.A-Chr19 f 146.0 12.8   8 4.51 0.0876 121.0, 162.0 0.31
B6.A-Chr19 m 146.0 7.21   8 2.55 0.0492 132.0, 156.0 0.14
B6.A-Chr2 f 143.0 16.0   8 5.64 0.111 125.0, 176.0 0.18
B6.A-Chr2 m 152.0 10.2   8 3.61 0.067 139.0, 170.0 0.41
B6.A-Chr3 f 144.0 20.0   8 7.06 0.138 126.0, 178.0 0.23
B6.A-Chr3 m 141.0 16.9   8 5.96 0.119 103.0, 160.0 -0.08
B6.A-Chr4 f 148.0 13.1   8 4.63 0.0888 130.0, 169.0 0.4
B6.A-Chr4 m 146.0 10.5   8 3.7 0.0718 134.0, 164.0 0.14
B6.A-Chr5 f 151.0 3.88   8 1.37 0.0258 145.0, 157.0 0.53
B6.A-Chr5 m 146.0 5.4   8 1.91 0.0371 137.0, 154.0 0.14
B6.A-Chr6 f 138.0 13.7   8 4.86 0.0992 115.0, 161.0 -0.03
B6.A-Chr6 m 143.0 6.94   8 2.45 0.0486 135.0, 155.0 0.01
B6.A-Chr7 f 146.0 9.66   8 3.42 0.0661 131.0, 159.0 0.31
B6.A-Chr7 m 154.0 11.8   8 4.17 0.0765 142.0, 178.0 0.5
B6.A-Chr8 f 136.0 21.5   8 7.59 0.158 107.0, 168.0 -0.12
B6.A-Chr8 m 153.0 8.94   8 3.16 0.0585 137.0, 167.0 0.45
B6.A-Chr9 f 151.0 6.25   8 2.21 0.0415 141.0, 160.0 0.53
B6.A-Chr9 m 139.0 10.2   8 3.6 0.0732 118.0, 149.0 -0.16
B6.A-ChrX f 143.0 8.82   8 3.12 0.0616 132.0, 157.0 0.18
B6.A-ChrX m 148.0 3.04   8 1.08 0.0206 145.0, 152.0 0.23
C57BL/6J f 144.0 11.5   8 4.05 0.0795 126.0, 161.0 0.23
C57BL/6J m 148.0 10.6   8 3.74 0.0715 134.0, 165.0 0.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 38.5 4.2673 46.8967 30.1033
A/J m 44.0 4.2673 52.3967 35.6033
B6.A-Chr1 f 141.375 4.2673 149.7717 132.9783
B6.A-Chr1 m 152.75 4.2673 161.1467 144.3533
B6.A-Chr10 f 122.25 4.2673 130.6467 113.8533
B6.A-Chr10 m 140.375 4.2673 148.7717 131.9783
B6.A-Chr11 f 144.625 4.2673 153.0217 136.2283
B6.A-Chr11 m 146.625 4.2673 155.0217 138.2283
B6.A-Chr12 f 132.625 4.2673 141.0217 124.2283
B6.A-Chr12 m 142.5 4.2673 150.8967 134.1033
B6.A-Chr13 f 144.25 4.2673 152.6467 135.8533
B6.A-Chr13 m 149.25 4.2673 157.6467 140.8533
B6.A-Chr14 f 150.125 4.2673 158.5217 141.7283
B6.A-Chr14 m 154.75 4.2673 163.1467 146.3533
B6.A-Chr15 f 143.0 4.2673 151.3967 134.6033
B6.A-Chr15 m 146.875 4.2673 155.2717 138.4783
B6.A-Chr16 f 148.5 4.2673 156.8967 140.1033
B6.A-Chr16 m 144.375 4.2673 152.7717 135.9783
B6.A-Chr17 f 154.0 4.2673 162.3967 145.6033
B6.A-Chr17 m 157.0 4.2673 165.3967 148.6033
B6.A-Chr18 f 142.75 4.2673 151.1467 134.3533
B6.A-Chr18 m 146.0 4.2673 154.3967 137.6033
B6.A-Chr19 f 145.625 4.2673 154.0217 137.2283
B6.A-Chr19 m 146.5 4.2673 154.8967 138.1033
B6.A-Chr2 f 143.375 4.2673 151.7717 134.9783
B6.A-Chr2 m 152.375 4.2673 160.7717 143.9783
B6.A-Chr3 f 144.5 4.2673 152.8967 136.1033
B6.A-Chr3 m 141.375 4.2673 149.7717 132.9783
B6.A-Chr4 f 147.625 4.2673 156.0217 139.2283
B6.A-Chr4 m 145.75 4.2673 154.1467 137.3533
B6.A-Chr5 f 150.75 4.2673 159.1467 142.3533
B6.A-Chr5 m 145.5 4.2673 153.8967 137.1033
B6.A-Chr6 f 138.5 4.2673 146.8967 130.1033
B6.A-Chr6 m 142.75 4.2673 151.1467 134.3533
B6.A-Chr7 f 146.25 4.2673 154.6467 137.8533
B6.A-Chr7 m 154.375 4.2673 162.7717 145.9783
B6.A-Chr8 f 136.125 4.2673 144.5217 127.7283
B6.A-Chr8 m 152.75 4.2673 161.1467 144.3533
B6.A-Chr9 f 150.625 4.2673 159.0217 142.2283
B6.A-Chr9 m 139.125 4.2673 147.5217 130.7283
B6.A-ChrX f 143.125 4.2673 151.5217 134.7283
B6.A-ChrX m 147.875 4.2673 156.2717 139.4783
C57BL/6J f 144.25 4.2673 152.6467 135.8533
C57BL/6J m 148.125 4.2673 156.5217 139.7283


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 41.25 3.0174 47.1874 35.3126
B6.A-Chr1 both 147.0625 3.0174 152.9999 141.1251
B6.A-Chr10 both 131.3125 3.0174 137.2499 125.3751
B6.A-Chr11 both 145.625 3.0174 151.5624 139.6876
B6.A-Chr12 both 137.5625 3.0174 143.4999 131.6251
B6.A-Chr13 both 146.75 3.0174 152.6874 140.8126
B6.A-Chr14 both 152.4375 3.0174 158.3749 146.5001
B6.A-Chr15 both 144.9375 3.0174 150.8749 139.0001
B6.A-Chr16 both 146.4375 3.0174 152.3749 140.5001
B6.A-Chr17 both 155.5 3.0174 161.4374 149.5626
B6.A-Chr18 both 144.375 3.0174 150.3124 138.4376
B6.A-Chr19 both 146.0625 3.0174 151.9999 140.1251
B6.A-Chr2 both 147.875 3.0174 153.8124 141.9376
B6.A-Chr3 both 142.9375 3.0174 148.8749 137.0001
B6.A-Chr4 both 146.6875 3.0174 152.6249 140.7501
B6.A-Chr5 both 148.125 3.0174 154.0624 142.1876
B6.A-Chr6 both 140.625 3.0174 146.5624 134.6876
B6.A-Chr7 both 150.3125 3.0174 156.2499 144.3751
B6.A-Chr8 both 144.4375 3.0174 150.3749 138.5001
B6.A-Chr9 both 144.875 3.0174 150.8124 138.9376
B6.A-ChrX both 145.5 3.0174 151.4374 139.5626
C57BL/6J both 146.1875 3.0174 152.1249 140.2501




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA