Project measure / variable:   Schonfeld1   LW

ID, description, units MPD:32361   LW   liver weight   [g]  
Data set, strains Schonfeld1   inbred   11 strains     sex: both     age: 9-13wks
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  STRAIN COMPARISON PLOT
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Schonfeld1 - liver weight



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means0.891   g 1.13   g
Median of the strain means0.870   g 1.10   g
SD of the strain means± 0.209 ± 0.167
Coefficient of variation (CV)0.234 0.147
Min–max range of strain means0.636   –   1.32   g 0.948   –   1.49   g
Mean sample size per strain6.2   mice 5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2.1703 2.1703 206.8207 < 0.0001
strain 8 2.0303 0.2538 24.1851 < 0.0001
sex:strain 8 0.3852 0.0481 4.588 0.0001
Residuals 86 0.9025 0.0105


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ f 0.749 0.149   10 0.047 0.198 0.53, 0.97 -0.68
129X1/SvJ m 0.98 0.106   5 0.0472 0.108 0.84, 1.09 -0.93
AKR/J f 1.32 0.13   5 0.0582 0.0983 1.15, 1.49 2.05
BALB/cByJ f 1.08 0.0752   10 0.0238 0.0693 0.94, 1.17 0.91
BALB/cByJ m 1.49 0.0515   5 0.023 0.0345 1.42, 1.56 2.13
BALB/cJ m 1.02 0.141   5 0.063 0.138 0.9, 1.25 -0.69
C3H/HeJ f 0.938 0.108   5 0.0482 0.115 0.82, 1.02 0.22
C3H/HeJ m 1.17 0.0627   5 0.028 0.0538 1.07, 1.23 0.21
C57BL/6ByJ f 0.942 0.122   5 0.0544 0.129 0.8, 1.13 0.24
C57BL/6ByJ m 1.31 0.204   5 0.0912 0.156 1.01, 1.57 1.05
C57BL/6J f 0.802 0.0764   10 0.0242 0.0953 0.65, 0.96 -0.43
C57BL/6J m 1.2 0.0567   5 0.0254 0.0474 1.12, 1.28 0.39
DBA/1LacJ f 0.774 0.0568   5 0.0254 0.0734 0.68, 0.81 -0.56
DBA/1LacJ m 1.07 0.0378   5 0.0169 0.0352 1.01, 1.1 -0.39
NZB/BlNJ f 1.0 0.0311   5 0.0139 0.0311 0.96, 1.03 0.52
NZB/BlNJ m 1.03 0.201   5 0.0901 0.195 0.78, 1.24 -0.63
PL/J f 0.67 0.0787   4 0.0394 0.118 0.6, 0.78 -1.06
PL/J m 0.948 0.0705   5 0.0315 0.0744 0.87, 1.02 -1.12
SWR/J f 0.636 0.027   5 0.0121 0.0425 0.6, 0.67 -1.22
SWR/J m 1.13 0.0676   5 0.0302 0.0597 1.05, 1.22 -0.03


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ f 0.749 0.0324 0.8134 0.6846
129X1/SvJ m 0.98 0.0458 1.0711 0.8889
BALB/cByJ f 1.084 0.0324 1.1484 1.0196
BALB/cByJ m 1.49 0.0458 1.5811 1.3989
C3H/HeJ f 0.938 0.0458 1.0291 0.8469
C3H/HeJ m 1.166 0.0458 1.2571 1.0749
C57BL/6ByJ f 0.942 0.0458 1.0331 0.8509
C57BL/6ByJ m 1.306 0.0458 1.3971 1.2149
C57BL/6J f 0.802 0.0324 0.8664 0.7376
C57BL/6J m 1.198 0.0458 1.2891 1.1069
DBA/1LacJ f 0.774 0.0458 0.8651 0.6829
DBA/1LacJ m 1.074 0.0458 1.1651 0.9829
NZB/BlNJ f 1.002 0.0458 1.0931 0.9109
NZB/BlNJ m 1.032 0.0458 1.1231 0.9409
PL/J f 0.67 0.0512 0.7718 0.5682
PL/J m 0.948 0.0458 1.0391 0.8569
SWR/J f 0.636 0.0458 0.7271 0.5449
SWR/J m 1.132 0.0458 1.2231 1.0409


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ both 0.8645 0.0281 0.9203 0.8087
BALB/cByJ both 1.287 0.0281 1.3428 1.2312
C3H/HeJ both 1.052 0.0324 1.1164 0.9876
C57BL/6ByJ both 1.124 0.0324 1.1884 1.0596
C57BL/6J both 1.0 0.0281 1.0558 0.9442
DBA/1LacJ both 0.924 0.0324 0.9884 0.8596
NZB/BlNJ both 1.017 0.0324 1.0814 0.9526
PL/J both 0.809 0.0344 0.8773 0.7407
SWR/J both 0.884 0.0324 0.9484 0.8196




  GWAS USING LINEAR MIXED MODELS