Project measure / variable:   Lake2   urination_arena

ID, description, units MPD:21709   urination_arena   number of urine puddles in arena   [n]  
Data set, strains Lake2   B6.A consomic w/par   23 strains     sex: both     age: 8wks
Procedure observation (SHIRPA)
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Lake2 - number of urine puddles in arena



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested23 strains23 strains
Mean of the strain means0.248   n 0.294   n
Median of the strain means0.250   n 0.250   n
SD of the strain means± 0.213 ± 0.227
Coefficient of variation (CV)0.861 0.773
Min–max range of strain means0   –   0.875   n 0   –   0.750   n
Mean sample size per strain8.0   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.2168 0.2168 1.132 0.2881
strain 22 8.1408 0.37 1.9322 0.0079
sex:strain 22 9.0379 0.4108 2.1452 0.0024
Residuals 320 61.2821 0.1915


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 0.0 0.0   8 0.0 0.0 -1.16
A/J m 0.75 0.463   8 0.164 0.617 2.0
B6.A-Chr1 f 0.0 0.0   8 0.0 0.0 -1.16
B6.A-Chr1 m 0.75 0.463   8 0.164 0.617 2.0
B6.A-Chr10 f 0.25 0.463   8 0.164 1.85 0.01
B6.A-Chr10 m 0.25 0.463   8 0.164 1.85 -0.19
B6.A-Chr11 f 0.125 0.354   8 0.125 2.83 -0.58
B6.A-Chr11 m 0.5 0.707   10 0.224 1.41 0.9
B6.A-Chr12 f 0.125 0.354   8 0.125 2.83 -0.58
B6.A-Chr12 m 0.25 0.463   8 0.164 1.85 -0.19
B6.A-Chr13 f 0.2 0.447   5 0.2 2.24 -0.22
B6.A-Chr13 m 0.143 0.378   7 0.143 2.65 -0.66
B6.A-Chr14 f 0.125 0.354   8 0.125 2.83 -0.58
B6.A-Chr14 m 0.375 0.518   8 0.183 1.38 0.35
B6.A-Chr15 f 0.0 0.0   8 0.0 0.0 -1.16
B6.A-Chr15 m 0.25 0.463   8 0.164 1.85 -0.19
B6.A-Chr16 f 0.125 0.354   8 0.125 2.83 -0.58
B6.A-Chr16 m 0.5 0.535   8 0.189 1.07 0.9
B6.A-Chr17 f 0.25 0.463   8 0.164 1.85 0.01
B6.A-Chr17 m 0.0 0.0   8 0.0 0.0 -1.29
B6.A-Chr18 f 0.25 0.463   8 0.164 1.85 0.01
B6.A-Chr18 m 0.0 0.0   8 0.0 0.0 -1.29
B6.A-Chr19 f 0.25 0.463   8 0.164 1.85 0.01
B6.A-Chr19 m 0.125 0.354   8 0.125 2.83 -0.74
B6.A-Chr2 f 0.375 0.518   8 0.183 1.38 0.6
B6.A-Chr2 m 0.125 0.354   8 0.125 2.83 -0.74
B6.A-Chr3 f 0.5 0.756   8 0.267 1.51 1.18
B6.A-Chr3 m 0.375 0.518   8 0.183 1.38 0.35
B6.A-Chr4 f 0.125 0.354   8 0.125 2.83 -0.58
B6.A-Chr4 m 0.25 0.463   8 0.164 1.85 -0.19
B6.A-Chr5 f 0.0 0.0   8 0.0 0.0 -1.16
B6.A-Chr5 m 0.25 0.463   8 0.164 1.85 -0.19
B6.A-Chr6 f 0.25 0.463   8 0.164 1.85 0.01
B6.A-Chr6 m 0.375 0.518   8 0.183 1.38 0.35
B6.A-Chr7 f 0.125 0.354   8 0.125 2.83 -0.58
B6.A-Chr7 m 0.25 0.463   8 0.164 1.85 -0.19
B6.A-Chr8 f 0.375 0.518   8 0.183 1.38 0.6
B6.A-Chr8 m 0.0 0.0   8 0.0 0.0 -1.29
B6.A-Chr9 f 0.625 0.518   8 0.183 0.828 1.77
B6.A-Chr9 m 0.5 0.756   8 0.267 1.51 0.9
B6.A-ChrX f 0.375 0.518   8 0.183 1.38 0.6
B6.A-ChrX m 0.125 0.354   8 0.125 2.83 -0.74
B6.A-ChrY f 0.375 0.518   8 0.183 1.38 0.6
B6.A-ChrY m 0.0 0.0   8 0.0 0.0 -1.29
C57BL/6J f 0.875 0.354   8 0.125 0.404 2.94
C57BL/6J m 0.625 0.518   8 0.183 0.828 1.45


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 0.0 0.1547 0.3044 -0.3044
A/J m 0.75 0.1547 1.0544 0.4456
B6.A-Chr1 f 0.0 0.1547 0.3044 -0.3044
B6.A-Chr1 m 0.75 0.1547 1.0544 0.4456
B6.A-Chr10 f 0.25 0.1547 0.5544 -0.0544
B6.A-Chr10 m 0.25 0.1547 0.5544 -0.0544
B6.A-Chr11 f 0.125 0.1547 0.4294 -0.1794
B6.A-Chr11 m 0.5 0.1384 0.7723 0.2277
B6.A-Chr12 f 0.125 0.1547 0.4294 -0.1794
B6.A-Chr12 m 0.25 0.1547 0.5544 -0.0544
B6.A-Chr13 f 0.2 0.1957 0.585 -0.185
B6.A-Chr13 m 0.1429 0.1654 0.4683 -0.1826
B6.A-Chr14 f 0.125 0.1547 0.4294 -0.1794
B6.A-Chr14 m 0.375 0.1547 0.6794 0.0706
B6.A-Chr15 f 0.0 0.1547 0.3044 -0.3044
B6.A-Chr15 m 0.25 0.1547 0.5544 -0.0544
B6.A-Chr16 f 0.125 0.1547 0.4294 -0.1794
B6.A-Chr16 m 0.5 0.1547 0.8044 0.1956
B6.A-Chr17 f 0.25 0.1547 0.5544 -0.0544
B6.A-Chr17 m 0.0 0.1547 0.3044 -0.3044
B6.A-Chr18 f 0.25 0.1547 0.5544 -0.0544
B6.A-Chr18 m 0.0 0.1547 0.3044 -0.3044
B6.A-Chr19 f 0.25 0.1547 0.5544 -0.0544
B6.A-Chr19 m 0.125 0.1547 0.4294 -0.1794
B6.A-Chr2 f 0.375 0.1547 0.6794 0.0706
B6.A-Chr2 m 0.125 0.1547 0.4294 -0.1794
B6.A-Chr3 f 0.5 0.1547 0.8044 0.1956
B6.A-Chr3 m 0.375 0.1547 0.6794 0.0706
B6.A-Chr4 f 0.125 0.1547 0.4294 -0.1794
B6.A-Chr4 m 0.25 0.1547 0.5544 -0.0544
B6.A-Chr5 f 0.0 0.1547 0.3044 -0.3044
B6.A-Chr5 m 0.25 0.1547 0.5544 -0.0544
B6.A-Chr6 f 0.25 0.1547 0.5544 -0.0544
B6.A-Chr6 m 0.375 0.1547 0.6794 0.0706
B6.A-Chr7 f 0.125 0.1547 0.4294 -0.1794
B6.A-Chr7 m 0.25 0.1547 0.5544 -0.0544
B6.A-Chr8 f 0.375 0.1547 0.6794 0.0706
B6.A-Chr8 m 0.0 0.1547 0.3044 -0.3044
B6.A-Chr9 f 0.625 0.1547 0.9294 0.3206
B6.A-Chr9 m 0.5 0.1547 0.8044 0.1956
B6.A-ChrX f 0.375 0.1547 0.6794 0.0706
B6.A-ChrX m 0.125 0.1547 0.4294 -0.1794
B6.A-ChrY f 0.375 0.1547 0.6794 0.0706
B6.A-ChrY m 0.0 0.1547 0.3044 -0.3044
C57BL/6J f 0.875 0.1547 1.1794 0.5706
C57BL/6J m 0.625 0.1547 0.9294 0.3206


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 0.375 0.1094 0.5902 0.1598
B6.A-Chr1 both 0.375 0.1094 0.5902 0.1598
B6.A-Chr10 both 0.25 0.1094 0.4652 0.0348
B6.A-Chr11 both 0.3125 0.1038 0.5167 0.1083
B6.A-Chr12 both 0.1875 0.1094 0.4027 -0.0277
B6.A-Chr13 both 0.1714 0.1281 0.4235 -0.0806
B6.A-Chr14 both 0.25 0.1094 0.4652 0.0348
B6.A-Chr15 both 0.125 0.1094 0.3402 -0.0902
B6.A-Chr16 both 0.3125 0.1094 0.5277 0.0973
B6.A-Chr17 both 0.125 0.1094 0.3402 -0.0902
B6.A-Chr18 both 0.125 0.1094 0.3402 -0.0902
B6.A-Chr19 both 0.1875 0.1094 0.4027 -0.0277
B6.A-Chr2 both 0.25 0.1094 0.4652 0.0348
B6.A-Chr3 both 0.4375 0.1094 0.6527 0.2223
B6.A-Chr4 both 0.1875 0.1094 0.4027 -0.0277
B6.A-Chr5 both 0.125 0.1094 0.3402 -0.0902
B6.A-Chr6 both 0.3125 0.1094 0.5277 0.0973
B6.A-Chr7 both 0.1875 0.1094 0.4027 -0.0277
B6.A-Chr8 both 0.1875 0.1094 0.4027 -0.0277
B6.A-Chr9 both 0.5625 0.1094 0.7777 0.3473
B6.A-ChrX both 0.25 0.1094 0.4652 0.0348
B6.A-ChrY both 0.1875 0.1094 0.4027 -0.0277
C57BL/6J both 0.75 0.1094 0.9652 0.5348




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA