Project measure / variable:   Crabbe3   ARR1_performance

ID, description, units MPD:15830   ARR1_performance   accelerating rotarod (ARR1) acquisition trial average over all trials (20 rpm/min)   [s]  
Data set, strains Crabbe3   inbred   8 strains     sex: both     age: 9-17wks
Procedure rotarod
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  STRAIN COMPARISON PLOT
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Crabbe3 - accelerating rotarod (ARR1) acquisition trial average over all trials (20 rpm/min)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means34.5   s 30.2   s
Median of the strain means29.4   s 28.9   s
SD of the strain means± 10.5 ± 7.08
Coefficient of variation (CV)0.305 0.234
Min–max range of strain means26.4   –   52.9   s 23.9   –   45.6   s
Mean sample size per strain5.8   mice 5.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 291.7739 291.7739 6.7278 0.0115
strain 7 5555.5035 793.6434 18.3001 < 0.0001
sex:strain 7 723.8789 103.4113 2.3845 0.0297
Residuals 73 3165.875 43.3682


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 30.8 9.43   6 3.85 0.307 19.8, 46.8 -0.35
129S1/SvImJ m 31.9 6.51   6 2.66 0.204 22.5, 41.2 0.24
A/J f 26.8 3.22   6 1.32 0.12 24.2, 32.0 -0.73
A/J m 29.3 5.25   6 2.14 0.179 24.1, 38.0 -0.13
BALB/cByJ f 34.4 8.81   6 3.6 0.256 25.7, 50.9 -0.01
BALB/cByJ m 32.9 7.52   4 3.76 0.229 25.9, 43.4 0.38
BTBR T+ Itpr3tf/J f 48.9 9.31   4 4.66 0.19 38.6, 59.2 1.37
BTBR T+ Itpr3tf/J m 28.5 6.15   3 3.55 0.216 22.4, 34.7 -0.24
C3H/HeJ f 27.6 5.03   6 2.05 0.182 22.5, 37.1 -0.65
C3H/HeJ m 25.2 2.93   6 1.19 0.116 22.2, 30.4 -0.71
C57BL/6J f 52.9 9.55   6 3.9 0.181 42.8, 64.0 1.75
C57BL/6J m 45.6 4.73   6 1.93 0.104 40.1, 52.7 2.18
DBA/2J f 26.4 5.88   6 2.4 0.222 19.9, 36.0 -0.77
DBA/2J m 24.3 6.95   6 2.84 0.286 19.7, 37.6 -0.83
FVB/NJ f 27.9 5.51   6 2.25 0.197 22.3, 36.4 -0.62
FVB/NJ m 23.9 4.96   6 2.03 0.207 19.4, 30.3 -0.89


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 30.75 2.6885 36.1082 25.3918
129S1/SvImJ m 31.8667 2.6885 37.2248 26.5085
A/J f 26.8333 2.6885 32.1915 21.4752
A/J m 29.3 2.6885 34.6582 23.9418
BALB/cByJ f 34.4 2.6885 39.7582 29.0418
BALB/cByJ m 32.9 3.2927 39.4624 26.3376
BTBR T+ Itpr3tf/J f 48.9 3.2927 55.4624 42.3376
BTBR T+ Itpr3tf/J m 28.4667 3.8021 36.0443 20.8891
C3H/HeJ f 27.5833 2.6885 32.9415 22.2252
C3H/HeJ m 25.25 2.6885 30.6082 19.8918
C57BL/6J f 52.85 2.6885 58.2082 47.4918
C57BL/6J m 45.6333 2.6885 50.9915 40.2752
DBA/2J f 26.4333 2.6885 31.7915 21.0752
DBA/2J m 24.35 2.6885 29.7082 18.9918
FVB/NJ f 27.9333 2.6885 33.2915 22.5752
FVB/NJ m 23.9333 2.6885 29.2915 18.5752


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 31.3083 1.9011 35.0971 27.5195
A/J both 28.0667 1.9011 31.8555 24.2779
BALB/cByJ both 33.65 2.1254 37.886 29.414
BTBR T+ Itpr3tf/J both 38.6833 2.5149 43.6954 33.6712
C3H/HeJ both 26.4167 1.9011 30.2055 22.6279
C57BL/6J both 49.2417 1.9011 53.0305 45.4529
DBA/2J both 25.3917 1.9011 29.1805 21.6029
FVB/NJ both 25.9333 1.9011 29.7221 22.1445




  GWAS USING LINEAR MIXED MODELS