Project measure / variable:   Jaxwest1   pulse

ID, description, units MPD:15111   pulse   pulse rate   [n/min]  
Data set, strains Jaxwest1   inbred   7 strains     sex: both     age: 9-14wks
Procedure tail cuff
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  STRAIN COMPARISON PLOT
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Jaxwest1 - pulse rate



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested7 strains7 strains
Mean of the strain means559   n/min 553   n/min
Median of the strain means554   n/min 554   n/min
SD of the strain means± 61.7 ± 67.2
Coefficient of variation (CV)0.110 0.122
Min–max range of strain means454   –   638   n/min 439   –   648   n/min
Mean sample size per strain6.9   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1174.56 1174.56 0.4032 0.5271
strain 6 333180.1241 55530.0207 19.0611 < 0.0001
sex:strain 6 27860.7658 4643.461 1.5939 0.1583
Residuals 88 256366.756 2913.2586


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 527.0 68.1   6 27.8 0.129 472.0, 640.0 -0.51
129S1/SvImJ m 509.0 67.2   8 23.7 0.132 403.0, 592.0 -0.65
A/J f 620.0 52.4   6 21.4 0.0845 539.0, 684.0 0.99
A/J m 554.0 43.6   6 17.8 0.0788 483.0, 588.0 0.01
BALB/cJ f 454.0 33.7   6 13.7 0.0742 412.0, 502.0 -1.7
BALB/cJ m 439.0 32.0   8 11.3 0.0728 379.0, 475.0 -1.7
C57BL/6J f 579.0 29.1   7 11.0 0.0502 541.0, 629.0 0.33
C57BL/6J m 564.0 68.6   8 24.2 0.121 480.0, 687.0 0.16
DBA/2J f 539.0 56.6   8 20.0 0.105 473.0, 635.0 -0.32
DBA/2J m 549.0 66.1   8 23.4 0.12 433.0, 653.0 -0.06
NOD/ShiLtJ f 638.0 61.0   7 23.1 0.0956 543.0, 719.0 1.29
NOD/ShiLtJ m 648.0 37.5   8 13.2 0.0578 599.0, 696.0 1.41
SJL/J f 554.0 40.1   8 14.2 0.0723 508.0, 638.0 -0.08
SJL/J m 608.0 66.7   8 23.6 0.11 503.0, 694.0 0.82


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 527.0 22.035 570.79 483.21
129S1/SvImJ m 508.875 19.0829 546.7983 470.9517
A/J f 619.5 22.035 663.29 575.71
A/J m 553.8333 22.035 597.6233 510.0433
BALB/cJ f 453.8333 22.035 497.6233 410.0433
BALB/cJ m 439.0 19.0829 476.9233 401.0767
C57BL/6J f 579.1429 20.4005 619.6845 538.6012
C57BL/6J m 564.375 19.0829 602.2983 526.4517
DBA/2J f 539.375 19.0829 577.2983 501.4517
DBA/2J m 548.625 19.0829 586.5483 510.7017
NOD/ShiLtJ f 637.8571 20.4005 678.3988 597.3155
NOD/ShiLtJ m 648.0 19.0829 685.9233 610.0767
SJL/J f 553.625 19.0829 591.5483 515.7017
SJL/J m 607.75 19.0829 645.6733 569.8267


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 517.9375 14.5748 546.9019 488.9731
A/J both 586.6667 15.5811 617.6309 555.7024
BALB/cJ both 446.4167 14.5748 475.381 417.4523
C57BL/6J both 571.7589 13.9673 599.5159 544.0019
DBA/2J both 544.0 13.4937 570.8158 517.1842
NOD/ShiLtJ both 642.9286 13.9673 670.6856 615.1716
SJL/J both 580.6875 13.4937 607.5033 553.8717




  GWAS USING LINEAR MIXED MODELS