Project measure / variable:   Justice2   MCH

ID, description, units MPD:13209   MCH   mean RBC corpuscular hemoglobin (MCH)   [pg]  
Data set, strains Justice2   inbred   16 strains     sex: both     age: 12-16wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Justice2 - mean RBC corpuscular hemoglobin (MCH)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains16 strains
Mean of the strain means15.7   pg 15.5   pg
Median of the strain means15.9   pg 15.6   pg
SD of the strain means± 0.819 ± 0.774
Coefficient of variation (CV)0.0521 0.0499
Min–max range of strain means14.0   –   16.9   pg 13.5   –   16.9   pg
Mean sample size per strain12.6   mice 12.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4.833 4.833 58.7264 < 0.0001
strain 15 228.4112 15.2274 185.029 < 0.0001
sex:strain 15 12.9458 0.8631 10.487 < 0.0001
Residuals 366 30.1209 0.0823


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 15.7 0.147   15 0.038 0.0094 15.5, 16.0 -0.02
129S1/SvImJ m 15.3 0.311   15 0.0804 0.0203 14.8, 15.9 -0.27
129S6/SvEvTac f 16.1 0.27   10 0.0854 0.0168 15.7, 16.5 0.47
129S6/SvEvTac m 15.9 0.259   10 0.0819 0.0163 15.5, 16.2 0.5
A/J f 15.3 0.288   10 0.091 0.0187 14.8, 15.7 -0.51
A/J m 15.1 0.231   8 0.0818 0.0154 14.9, 15.5 -0.53
BALB/cByJ f 16.0 0.184   15 0.0475 0.0115 15.7, 16.3 0.34
BALB/cByJ m 15.8 0.322   15 0.0831 0.0204 15.4, 16.5 0.37
BALB/cJ f 16.6 0.284   10 0.0897 0.0171 16.3, 17.1 1.08
BALB/cJ m 16.0 0.194   9 0.0648 0.0121 15.8, 16.3 0.63
BTBR T+ Itpr3tf/J f 16.5 0.181   10 0.0573 0.011 16.3, 16.9 0.95
BTBR T+ Itpr3tf/J m 16.1 0.143   10 0.0453 0.00893 15.8, 16.3 0.76
C3HeB/FeJ f 16.6 0.191   15 0.0492 0.0115 16.3, 17.0 1.08
C3HeB/FeJ m 16.2 0.201   15 0.0518 0.0124 16.0, 16.6 0.89
C3H/HeJ f 16.9 0.2   10 0.0633 0.0119 16.6, 17.2 1.44
C3H/HeJ m 16.9 0.321   10 0.102 0.019 16.4, 17.4 1.79
C57BL/10J f 14.7 0.135   13 0.0376 0.00921 14.5, 14.9 -1.24
C57BL/10J m 14.5 0.232   15 0.06 0.0161 13.9, 14.8 -1.31
C57BL/6J f 15.1 0.209   15 0.0539 0.0138 14.8, 15.6 -0.76
C57BL/6J m 15.4 0.332   14 0.0889 0.0216 14.9, 15.9 -0.15
CAST/EiJ f 14.6 0.606   10 0.192 0.0416 14.0, 15.9 -1.37
CAST/EiJ m 15.6 0.508   9 0.169 0.0326 14.4, 16.1 0.11
CBA/CaJ f 16.3 0.496   14 0.133 0.0305 15.8, 17.2 0.71
CBA/CaJ m 15.7 0.317   14 0.0848 0.0202 14.9, 16.3 0.24
CBA/J f 15.9 0.306   10 0.0968 0.0192 15.6, 16.5 0.22
CBA/J m 15.9 0.254   9 0.0846 0.0159 15.4, 16.2 0.5
DBA/2J f 14.0 0.142   15 0.0368 0.0102 13.7, 14.2 -2.1
DBA/2J m 13.5 0.277   14 0.0741 0.0205 12.7, 13.9 -2.6
FVB/NJ f 15.8 0.391   15 0.101 0.0248 15.5, 17.1 0.1
FVB/NJ m 15.2 0.139   15 0.0358 0.00914 15.0, 15.5 -0.4
SJL/J f 15.4 0.296   15 0.0765 0.0193 14.9, 15.8 -0.39
SJL/J m 15.1 0.293   14 0.0782 0.0193 14.5, 15.6 -0.53


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 15.68 0.0741 15.8257 15.5343
129S1/SvImJ m 15.34 0.0741 15.4857 15.1943
129S6/SvEvTac f 16.08 0.0907 16.2584 15.9016
129S6/SvEvTac m 15.86 0.0907 16.0384 15.6816
A/J f 15.35 0.0907 15.5284 15.1716
A/J m 15.075 0.1014 15.2745 14.8755
BALB/cByJ f 15.9667 0.0741 16.1123 15.821
BALB/cByJ m 15.7933 0.0741 15.939 15.6477
BALB/cJ f 16.56 0.0907 16.7384 16.3816
BALB/cJ m 16.0444 0.0956 16.2325 15.8564
BTBR T+ Itpr3tf/J f 16.52 0.0907 16.6984 16.3416
BTBR T+ Itpr3tf/J m 16.05 0.0907 16.2284 15.8716
C3HeB/FeJ f 16.5933 0.0741 16.739 16.4477
C3HeB/FeJ m 16.22 0.0741 16.3657 16.0743
C3H/HeJ f 16.87 0.0907 17.0484 16.6916
C3H/HeJ m 16.91 0.0907 17.0884 16.7316
C57BL/10J f 14.7 0.0796 14.8565 14.5435
C57BL/10J m 14.46 0.0741 14.6057 14.3143
C57BL/6J f 15.0933 0.0741 15.239 14.9477
C57BL/6J m 15.3857 0.0767 15.5365 15.2349
CAST/EiJ f 14.56 0.0907 14.7384 14.3816
CAST/EiJ m 15.5556 0.0956 15.7436 15.3675
CBA/CaJ f 16.2857 0.0767 16.4365 16.1349
CBA/CaJ m 15.6929 0.0767 15.8436 15.5421
CBA/J f 15.94 0.0907 16.1184 15.7616
CBA/J m 15.9222 0.0956 16.1103 15.7342
DBA/2J f 13.98 0.0741 14.1257 13.8343
DBA/2J m 13.5 0.0767 13.6508 13.3492
FVB/NJ f 15.76 0.0741 15.9057 15.6143
FVB/NJ m 15.1733 0.0741 15.319 15.0277
SJL/J f 15.3733 0.0741 15.519 15.2277
SJL/J m 15.1429 0.0767 15.2936 14.9921


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 15.51 0.0524 15.613 15.407
129S6/SvEvTac both 15.97 0.0641 16.0961 15.8439
A/J both 15.2125 0.068 15.3463 15.0787
BALB/cByJ both 15.88 0.0524 15.983 15.777
BALB/cJ both 16.3022 0.0659 16.4318 16.1726
BTBR T+ Itpr3tf/J both 16.285 0.0641 16.4111 16.1589
C3HeB/FeJ both 16.4067 0.0524 16.5097 16.3037
C3H/HeJ both 16.89 0.0641 17.0161 16.7639
C57BL/10J both 14.58 0.0544 14.6869 14.4731
C57BL/6J both 15.2395 0.0533 15.3443 15.1347
CAST/EiJ both 15.0578 0.0659 15.1874 14.9282
CBA/CaJ both 15.9893 0.0542 16.0959 15.8827
CBA/J both 15.9311 0.0659 16.0607 15.8015
DBA/2J both 13.74 0.0533 13.8448 13.6352
FVB/NJ both 15.4667 0.0524 15.5697 15.3637
SJL/J both 15.2581 0.0533 15.3629 15.1533




  GWAS USING LINEAR MIXED MODELS