Project measure / variable:   Graubert1   pct_LYMP

ID, description, units MPD:11605   pct_LYMP   lymphocyte differential (LYM; percentage of total WBC)   [%]  
Data set, strains Graubert1   inbred   20 strains     sex: both     age: 9wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Graubert1 - lymphocyte differential (LYM; percentage of total WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested20 strains20 strains
Mean of the strain means70.1   % 67.8   %
Median of the strain means69.5   % 65.5   %
SD of the strain means± 6.83 ± 8.79
Coefficient of variation (CV)0.0974 0.130
Min–max range of strain means59.2   –   84.6   % 55.7   –   83.5   %
Mean sample size per strain11.9   mice 11.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 654.4485 654.4485 11.7634 0.0007
strain 19 26117.2185 1374.5904 24.7075 < 0.0001
sex:strain 19 1349.8616 71.0453 1.277 0.1938
Residuals 422 23477.745 55.6345


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 67.6 6.22   12 1.8 0.0921 58.6, 79.6 -0.37
129S1/SvImJ m 64.5 9.39   12 2.71 0.145 50.5, 76.8 -0.37
A/J f 76.5 4.49   12 1.3 0.0587 68.3, 82.2 0.93
A/J m 77.1 5.02   12 1.45 0.0651 66.8, 84.5 1.06
AKR/J f 63.7 5.91   12 1.71 0.0928 54.8, 73.0 -0.94
AKR/J m 59.1 10.9   12 3.14 0.184 44.9, 76.1 -0.99
BALB/cByJ f 71.9 5.01   12 1.45 0.0697 61.0, 79.2 0.26
BALB/cByJ m 74.0 5.87   12 1.69 0.0793 60.5, 82.0 0.71
C3H/HeJ f 61.5 6.01   12 1.73 0.0977 50.4, 71.2 -1.26
C3H/HeJ m 56.6 5.4   12 1.56 0.0954 45.1, 63.8 -1.27
C57BL/6J f 71.2 8.26   12 2.38 0.116 50.1, 79.9 0.16
C57BL/6J m 63.5 11.7   13 3.24 0.184 50.6, 79.3 -0.49
C57L/J f 74.8 15.6   12 4.52 0.209 38.0, 88.2 0.68
C57L/J m 76.2 11.6   12 3.36 0.153 56.9, 87.5 0.96
C58/J f 71.2 3.47   12 1.0 0.0488 66.0, 77.4 0.16
C58/J m 67.4 8.02   12 2.31 0.119 56.6, 79.5 -0.04
CAST/EiJ f 77.9 5.58   12 1.61 0.0716 68.2, 84.4 1.14
CAST/EiJ m 77.9 3.93   12 1.14 0.0505 68.6, 82.1 1.15
DBA/2J f 69.5 6.4   11 1.93 0.0921 58.0, 80.5 -0.09
DBA/2J m 72.4 3.26   9 1.09 0.045 66.2, 75.9 0.53
FVB/NJ f 82.0 3.86   11 1.16 0.0471 74.3, 87.6 1.74
FVB/NJ m 83.5 4.46   12 1.29 0.0534 77.5, 89.6 1.79
MOLF/EiJ f 64.8 6.49   3 3.75 0.1 57.8, 70.6 -0.78
MOLF/EiJ m 61.3 6.09   11 1.84 0.0995 51.6, 68.2 -0.74
NOD/ShiLtJ f 59.2 10.6   12 3.06 0.179 35.1, 72.9 -1.6
NOD/ShiLtJ m 55.7 8.41   12 2.43 0.151 37.4, 68.2 -1.37
NZB/BlNJ f 62.7 7.77   12 2.24 0.124 51.8, 75.4 -1.09
NZB/BlNJ m 56.4 5.41   12 1.56 0.096 42.5, 65.7 -1.29
PERA/EiJ f 66.9 8.52   12 2.46 0.127 52.9, 81.3 -0.47
PERA/EiJ m 61.7 5.84   12 1.69 0.0947 51.3, 68.1 -0.69
PL/J f 69.4 4.83   12 1.4 0.0696 59.1, 76.7 -0.11
PL/J m 65.6 5.52   12 1.59 0.0841 55.6, 72.3 -0.25
SJL/J f 84.6 4.9   12 1.41 0.0579 74.8, 91.4 2.12
SJL/J m 80.3 4.2   12 1.21 0.0523 73.3, 87.7 1.43
SM/J f 63.6 8.9   12 2.57 0.14 45.6, 74.6 -0.96
SM/J m 65.5 7.87   12 2.27 0.12 48.1, 73.5 -0.26
SPRET/EiJ f 68.3 7.39   13 2.05 0.108 50.8, 80.5 -0.27
SPRET/EiJ m 59.8 5.99   7 2.26 0.1 51.3, 68.9 -0.91
SWR/J f 75.2 10.0   12 2.89 0.133 50.6, 86.4 0.74
SWR/J m 77.0 7.0   12 2.02 0.0909 63.9, 87.4 1.05


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 67.5667 2.1532 71.799 63.3344
129S1/SvImJ m 64.525 2.1532 68.7573 60.2927
A/J f 76.5 2.1532 80.7323 72.2677
A/J m 77.075 2.1532 81.3073 72.8427
AKR/J f 63.6833 2.1532 67.9156 59.451
AKR/J m 59.125 2.1532 63.3573 54.8927
BALB/cByJ f 71.85 2.1532 76.0823 67.6177
BALB/cByJ m 73.9917 2.1532 78.224 69.7594
C3H/HeJ f 61.475 2.1532 65.7073 57.2427
C3H/HeJ m 56.5917 2.1532 60.824 52.3594
C57BL/6J f 71.2333 2.1532 75.4656 67.001
C57BL/6J m 63.5 2.0687 67.5663 59.4337
C57L/J f 74.8417 2.1532 79.074 70.6094
C57L/J m 76.2 2.1532 80.4323 71.9677
C58/J f 71.2167 2.1532 75.449 66.9844
C58/J m 67.4333 2.1532 71.6656 63.201
CAST/EiJ f 77.9167 2.1532 82.149 73.6844
CAST/EiJ m 77.925 2.1532 82.1573 73.6927
DBA/2J f 69.5273 2.2489 73.9478 65.1068
DBA/2J m 72.4 2.4863 77.287 67.513
FVB/NJ f 81.9818 2.2489 86.4023 77.5613
FVB/NJ m 83.525 2.1532 87.7573 79.2927
MOLF/EiJ f 64.8333 4.3064 73.2979 56.3687
MOLF/EiJ m 61.2545 2.2489 65.675 56.834
NOD/ShiLtJ f 59.1667 2.1532 63.399 54.9344
NOD/ShiLtJ m 55.7 2.1532 59.9323 51.4677
NZB/BlNJ f 62.675 2.1532 66.9073 58.4427
NZB/BlNJ m 56.425 2.1532 60.6573 52.1927
PERA/EiJ f 66.9083 2.1532 71.1406 62.676
PERA/EiJ m 61.6917 2.1532 65.924 57.4594
PL/J f 69.4083 2.1532 73.6406 65.176
PL/J m 65.6 2.1532 69.8323 61.3677
SJL/J f 84.65 2.1532 88.8823 80.4177
SJL/J m 80.2583 2.1532 84.4906 76.026
SM/J f 63.625 2.1532 67.8573 59.3927
SM/J m 65.4667 2.1532 69.699 61.2344
SPRET/EiJ f 68.3154 2.0687 72.3817 64.2491
SPRET/EiJ m 59.7714 2.8192 65.3128 54.23
SWR/J f 75.1583 2.1532 79.3906 70.926
SWR/J m 77.025 2.1532 81.2573 72.7927


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 66.0458 1.5225 69.0385 63.0531
A/J both 76.7875 1.5225 79.7802 73.7948
AKR/J both 61.4042 1.5225 64.3969 58.4115
BALB/cByJ both 72.9208 1.5225 75.9135 69.9281
C3H/HeJ both 59.0333 1.5225 62.026 56.0406
C57BL/6J both 67.3667 1.493 70.3012 64.4321
C57L/J both 75.5208 1.5225 78.5135 72.5281
C58/J both 69.325 1.5225 72.3177 66.3323
CAST/EiJ both 77.9208 1.5225 80.9135 74.9281
DBA/2J both 70.9636 1.6763 74.2585 67.6688
FVB/NJ both 82.7534 1.5568 85.8134 79.6935
MOLF/EiJ both 63.0439 2.4291 67.8186 58.2693
NOD/ShiLtJ both 57.4333 1.5225 60.426 54.4406
NZB/BlNJ both 59.55 1.5225 62.5427 56.5573
PERA/EiJ both 64.3 1.5225 67.2927 61.3073
PL/J both 67.5042 1.5225 70.4969 64.5115
SJL/J both 82.4542 1.5225 85.4469 79.4615
SM/J both 64.5458 1.5225 67.5385 61.5531
SPRET/EiJ both 64.0434 1.7484 67.48 60.6068
SWR/J both 76.0917 1.5225 79.0844 73.099




  GWAS USING LINEAR MIXED MODELS