Project measure / variable:   Golani1   HBO

ID, description, units MPD:10915   HBO   home base relative occupancy, 30 min test, sector in degrees, log transformed   [log(deg)]  
Data set, strains Golani1   inbred   8 strains     sex: m     age: 10wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Golani1 - home base relative occupancy, 30 min test, sector in degrees, log transformed



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means-1.28   log(deg)
Median of the strain means-1.40   log(deg)
SD of the strain means± 0.357
Coefficient of variation (CV)-0.279
Min–max range of strain means-1.68   –   -0.600   log(deg)
Mean sample size per strain34.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 30.077 4.2967 21.9287 < 0.0001
Residuals 268 52.512 0.1959


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m -1.09 0.559   34 0.0959 -0.514 -1.85, -0.03 0.52
A/J m -0.997 0.501   32 0.0886 -0.502 -1.88, -0.09 0.79
BALB/cByJ m -0.6 0.436   33 0.0759 -0.726 -1.78, 0.0 1.9
C3H/HeJ m -1.55 0.474   35 0.0801 -0.307 -2.4, -0.49 -0.77
C57BL/6J m -1.68 0.338   36 0.0564 -0.202 -2.31, -0.85 -1.13
DBA/2J m -1.37 0.442   36 0.0737 -0.322 -2.17, -0.12 -0.26
FVB/NJ m -1.5 0.435   36 0.0725 -0.289 -2.43, -0.63 -0.62
SJL/J m -1.43 0.313   34 0.0537 -0.219 -2.14, -0.75 -0.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m -1.0871 0.0759 -0.9376 -1.2365
A/J m -0.9975 0.0783 -0.8434 -1.1516
BALB/cByJ m -0.6 0.0771 -0.4483 -0.7517
C3H/HeJ m -1.5454 0.0748 -1.3981 -1.6927
C57BL/6J m -1.6769 0.0738 -1.5317 -1.8222
DBA/2J m -1.3714 0.0738 -1.2261 -1.5166
FVB/NJ m -1.5031 0.0738 -1.3578 -1.6483
SJL/J m -1.4318 0.0759 -1.2823 -1.5812




  GWAS USING LINEAR MIXED MODELS