Project measure / variable:   Tordoff3   fat_wt

ID, description, units MPD:10329   fat_wt   weight of fat tissue, head excluded   [g]  
Data set, strains Tordoff3   inbred w/CC7   40 strains     sex: both     age: 14-18wks
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  STRAIN COMPARISON PLOT
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Tordoff3 - weight of fat tissue, head excluded



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested40 strains40 strains
Mean of the strain means4.84   g 7.19   g
Median of the strain means4.25   g 6.71   g
SD of the strain means± 2.76 ± 3.41
Coefficient of variation (CV)0.570 0.474
Min–max range of strain means1.96   –   17.6   g 2.44   –   20.1   g
Mean sample size per strain9.7   mice 9.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1179.6511 1179.6511 377.1549 < 0.0001
strain 39 6325.8821 162.2021 51.8588 < 0.0001
sex:strain 39 1132.763 29.0452 9.2863 < 0.0001
Residuals 707 2211.3281 3.1278


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 4.24 0.762   10 0.241 0.18 2.9, 5.4 -0.22
129S1/SvImJ m 6.32 0.902   9 0.301 0.143 4.6, 7.1 -0.26
A/J f 4.94 0.792   10 0.25 0.16 3.8, 6.7 0.04
A/J m 6.72 2.58   10 0.816 0.384 3.7, 12.5 -0.14
AKR/J f 5.82 2.75   9 0.915 0.472 3.0, 12.1 0.36
AKR/J m 11.3 2.82   10 0.891 0.25 8.0, 17.6 1.2
BALB/cByJ f 4.36 0.849   9 0.283 0.195 3.6, 6.2 -0.17
BALB/cByJ m 6.66 1.14   10 0.362 0.172 5.1, 9.2 -0.16
BTBR T+ Itpr3tf/J f 5.25 0.785   10 0.248 0.15 4.1, 6.5 0.15
BTBR T+ Itpr3tf/J m 7.74 2.03   10 0.641 0.262 5.2, 11.3 0.16
BUB/BnJ f 5.41 0.682   10 0.216 0.126 4.4, 6.6 0.21
BUB/BnJ m 8.02 2.11   9 0.704 0.263 5.7, 11.8 0.24
C3H/HeJ f 4.37 0.919   10 0.291 0.21 3.2, 5.7 -0.17
C3H/HeJ m 7.05 1.34   10 0.423 0.19 5.6, 9.4 -0.04
C57BL/10J f 4.25 0.53   10 0.167 0.125 3.4, 5.0 -0.21
C57BL/10J m 8.27 1.78   10 0.563 0.215 5.0, 11.4 0.32
C57BL/6J f 4.44 2.05   9 0.683 0.461 3.1, 9.6 -0.14
C57BL/6J m 6.13 1.69   9 0.563 0.275 4.5, 9.5 -0.31
C57BLKS/J f 3.85 0.467   10 0.148 0.121 3.2, 4.7 -0.36
C57BLKS/J m 6.21 1.24   8 0.437 0.199 4.4, 8.0 -0.29
C57BR/cdJ f 3.93 0.451   15 0.116 0.115 3.3, 4.9 -0.33
C57BR/cdJ m 8.53 3.0   13 0.832 0.352 4.4, 13.5 0.39
C57L/J f 3.66 0.502   10 0.159 0.137 2.9, 4.6 -0.43
C57L/J m 6.7 1.91   10 0.605 0.285 4.0, 9.3 -0.14
C58/J f 3.41 0.468   9 0.156 0.137 2.9, 4.2 -0.52
C58/J m 3.86 0.604   9 0.201 0.157 3.1, 4.9 -0.98
CAST/EiJ f 2.25 0.227   10 0.0719 0.101 2.0, 2.8 -0.94
CAST/EiJ m 2.66 0.291   10 0.0921 0.11 2.2, 3.1 -1.33
CBA/J f 5.48 1.51   10 0.476 0.275 3.3, 8.1 0.23
CBA/J m 12.0 1.96   10 0.619 0.163 9.1, 16.0 1.41
CE/J f 3.62 1.03   9 0.342 0.283 2.1, 4.7 -0.44
CE/J m 5.24 0.905   8 0.32 0.173 3.9, 6.1 -0.57
CZECHII/EiJ f 2.26 0.288   9 0.0959 0.128 1.8, 2.7 -0.94
CZECHII/EiJ m 2.44 0.263   10 0.0833 0.108 2.1, 2.9 -1.39
DBA/2J f 4.41 0.563   10 0.178 0.128 3.5, 5.4 -0.16
DBA/2J m 8.67 2.22   10 0.701 0.256 6.2, 12.6 0.43
FVB/NJ f 4.23 1.68   10 0.531 0.397 2.9, 8.7 -0.22
FVB/NJ m 5.65 0.972   10 0.307 0.172 4.1, 7.4 -0.45
I/LnJ f 3.01 0.489   10 0.155 0.162 2.5, 4.1 -0.66
I/LnJ m 4.79 2.19   10 0.693 0.457 2.8, 10.1 -0.71
JF1/MsJ f 3.99 1.78   10 0.563 0.446 2.6, 8.1 -0.31
JF1/MsJ m 11.9 4.17   10 1.32 0.351 4.1, 15.5 1.38
KK/HlJ f 17.6 1.77   10 0.56 0.101 15.5, 20.1 4.63
KK/HlJ m 12.7 2.91   10 0.919 0.23 4.7, 14.7 1.62
LP/J f 4.31 0.603   10 0.191 0.14 3.5, 5.3 -0.19
LP/J m 9.3 2.86   10 0.903 0.307 6.0, 15.5 0.62
MA/MyJ f 5.49 1.24   8 0.44 0.227 4.2, 7.3 0.24
MA/MyJ m 9.87 2.08   15 0.536 0.21 6.4, 13.9 0.79
MOLF/EiJ f 2.53 0.283   9 0.0943 0.112 2.2, 2.9 -0.84
MOLF/EiJ m 2.59 0.251   10 0.0795 0.0971 2.2, 2.9 -1.35
MSM/MsJ f 1.96 0.158   10 0.0499 0.0805 1.8, 2.3 -1.04
MSM/MsJ m 2.48 0.349   10 0.11 0.141 1.9, 3.0 -1.38
NOD/ShiLtJ f 4.44 1.09   8 0.384 0.245 2.5, 6.2 -0.14
NOD/ShiLtJ m 6.63 1.39   10 0.439 0.209 5.0, 8.6 -0.17
NON/ShiLtJ f 11.5 3.83   10 1.21 0.332 6.8, 18.9 2.42
NON/ShiLtJ m 20.1 2.44   10 0.773 0.121 15.0, 23.3 3.79
NZB/BlNJ f 7.44 2.13   10 0.673 0.286 4.6, 10.8 0.94
NZB/BlNJ m 8.56 3.35   10 1.06 0.391 4.4, 13.4 0.4
NZW/LacJ f 8.51 1.71   10 0.542 0.202 6.4, 10.6 1.33
NZW/LacJ m 7.46 1.48   10 0.467 0.198 5.9, 9.6 0.08
PERA/EiJ f 6.85 2.06   10 0.651 0.301 4.2, 9.9 0.73
PERA/EiJ m 8.0 1.56   10 0.493 0.195 6.1, 11.4 0.24
PL/J f 4.26 0.47   10 0.148 0.11 3.5, 5.1 -0.21
PL/J m 8.59 1.22   10 0.387 0.142 6.8, 10.5 0.41
PWK/PhJ f 3.35 0.706   10 0.223 0.211 2.2, 4.4 -0.54
PWK/PhJ m 3.59 0.768   10 0.243 0.214 2.7, 4.9 -1.06
RIIIS/J f 7.26 4.68   10 1.48 0.645 3.1, 14.2 0.88
RIIIS/J m 9.76 4.13   10 1.31 0.423 4.2, 14.8 0.75
SEA/GnJ f 4.53 0.574   10 0.181 0.127 3.5, 5.5 -0.11
SEA/GnJ m 7.65 2.07   10 0.653 0.27 3.9, 11.4 0.13
SJL/J f 4.12 1.08   10 0.341 0.262 3.1, 6.8 -0.26
SJL/J m 6.56 2.26   10 0.715 0.345 5.1, 11.2 -0.19
SM/J f 3.11 0.798   10 0.252 0.257 1.9, 4.4 -0.63
SM/J m 5.14 1.72   10 0.545 0.335 3.6, 8.5 -0.6
SPRET/EiJ f 3.54 0.482   9 0.161 0.136 2.9, 4.3 -0.47
SPRET/EiJ m 5.22 0.998   5 0.447 0.191 4.1, 6.7 -0.58
SWR/J f 3.08 1.14   10 0.361 0.371 2.3, 6.0 -0.64
SWR/J m 3.68 0.418   9 0.139 0.114 3.1, 4.4 -1.03
WSB/EiJ f 2.45 0.56   10 0.177 0.229 2.0, 3.9 -0.87
WSB/EiJ m 2.99 0.543   10 0.172 0.181 2.3, 4.1 -1.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 4.24 0.5593 5.338 3.142
129S1/SvImJ m 6.3222 0.5895 7.4796 5.1648
A/J f 4.94 0.5593 6.038 3.842
A/J m 6.72 0.5593 7.818 5.622
AKR/J f 5.8222 0.5895 6.9796 4.6648
AKR/J m 11.27 0.5593 12.368 10.172
BALB/cByJ f 4.3556 0.5895 5.513 3.1981
BALB/cByJ m 6.66 0.5593 7.758 5.562
BTBR T+ Itpr3tf/J f 5.25 0.5593 6.348 4.152
BTBR T+ Itpr3tf/J m 7.74 0.5593 8.838 6.642
BUB/BnJ f 5.41 0.5593 6.508 4.312
BUB/BnJ m 8.0222 0.5895 9.1796 6.8648
C3H/HeJ f 4.37 0.5593 5.468 3.272
C3H/HeJ m 7.05 0.5593 8.148 5.952
C57BL/10J f 4.25 0.5593 5.348 3.152
C57BL/10J m 8.27 0.5593 9.368 7.172
C57BL/6J f 4.4444 0.5895 5.6019 3.287
C57BL/6J m 6.1333 0.5895 7.2907 4.9759
C57BLKS/J f 3.85 0.5593 4.948 2.752
C57BLKS/J m 6.2125 0.6253 7.4401 4.9849
C57BR/cdJ f 3.9267 0.4566 4.8232 3.0301
C57BR/cdJ m 8.5308 0.4905 9.4938 7.5677
C57L/J f 3.66 0.5593 4.758 2.562
C57L/J m 6.7 0.5593 7.798 5.602
C58/J f 3.4111 0.5895 4.5685 2.2537
C58/J m 3.8556 0.5895 5.013 2.6981
CAST/EiJ f 2.25 0.5593 3.348 1.152
CAST/EiJ m 2.66 0.5593 3.758 1.562
CBA/J f 5.48 0.5593 6.578 4.382
CBA/J m 11.99 0.5593 13.088 10.892
CE/J f 3.6222 0.5895 4.7796 2.4648
CE/J m 5.2375 0.6253 6.4651 4.0099
CZECHII/EiJ f 2.2556 0.5895 3.413 1.0981
CZECHII/EiJ m 2.44 0.5593 3.538 1.342
DBA/2J f 4.41 0.5593 5.508 3.312
DBA/2J m 8.67 0.5593 9.768 7.572
FVB/NJ f 4.23 0.5593 5.328 3.132
FVB/NJ m 5.65 0.5593 6.748 4.552
I/LnJ f 3.01 0.5593 4.108 1.912
I/LnJ m 4.79 0.5593 5.888 3.692
JF1/MsJ f 3.99 0.5593 5.088 2.892
JF1/MsJ m 11.89 0.5593 12.988 10.792
KK/HlJ f 17.57 0.5593 18.668 16.472
KK/HlJ m 12.66 0.5593 13.758 11.562
LP/J f 4.31 0.5593 5.408 3.212
LP/J m 9.3 0.5593 10.398 8.202
MA/MyJ f 5.4875 0.6253 6.7151 4.2599
MA/MyJ m 9.8667 0.4566 10.7632 8.9701
MOLF/EiJ f 2.5333 0.5895 3.6907 1.3759
MOLF/EiJ m 2.59 0.5593 3.688 1.492
MSM/MsJ f 1.96 0.5593 3.058 0.862
MSM/MsJ m 2.48 0.5593 3.578 1.382
NOD/ShiLtJ f 4.4375 0.6253 5.6651 3.2099
NOD/ShiLtJ m 6.63 0.5593 7.728 5.532
NON/ShiLtJ f 11.54 0.5593 12.638 10.442
NON/ShiLtJ m 20.13 0.5593 21.228 19.032
NZB/BlNJ f 7.44 0.5593 8.538 6.342
NZB/BlNJ m 8.56 0.5593 9.658 7.462
NZW/LacJ f 8.51 0.5593 9.608 7.412
NZW/LacJ m 7.46 0.5593 8.558 6.362
PERA/EiJ f 6.85 0.5593 7.948 5.752
PERA/EiJ m 8.0 0.5593 9.098 6.902
PL/J f 4.26 0.5593 5.358 3.162
PL/J m 8.59 0.5593 9.688 7.492
PWK/PhJ f 3.35 0.5593 4.448 2.252
PWK/PhJ m 3.59 0.5593 4.688 2.492
RIIIS/J f 7.26 0.5593 8.358 6.162
RIIIS/J m 9.76 0.5593 10.858 8.662
SEA/GnJ f 4.53 0.5593 5.628 3.432
SEA/GnJ m 7.65 0.5593 8.748 6.552
SJL/J f 4.12 0.5593 5.218 3.022
SJL/J m 6.56 0.5593 7.658 5.462
SM/J f 3.11 0.5593 4.208 2.012
SM/J m 5.14 0.5593 6.238 4.042
SPRET/EiJ f 3.5444 0.5895 4.7019 2.387
SPRET/EiJ m 5.22 0.7909 6.7728 3.6672
SWR/J f 3.08 0.5593 4.178 1.982
SWR/J m 3.6778 0.5895 4.8352 2.5204
WSB/EiJ f 2.45 0.5593 3.548 1.352
WSB/EiJ m 2.99 0.5593 4.088 1.892


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 5.2811 0.4063 6.0788 4.4834
A/J both 5.83 0.3955 6.6064 5.0536
AKR/J both 8.5461 0.4063 9.3438 7.7484
BALB/cByJ both 5.5078 0.4063 6.3055 4.7101
BTBR T+ Itpr3tf/J both 6.495 0.3955 7.2714 5.7186
BUB/BnJ both 6.7161 0.4063 7.5138 5.9184
C3H/HeJ both 5.71 0.3955 6.4864 4.9336
C57BL/10J both 6.26 0.3955 7.0364 5.4836
C57BL/6J both 5.2889 0.4169 6.1073 4.4705
C57BLKS/J both 5.0313 0.4194 5.8548 4.2077
C57BR/cdJ both 6.2287 0.3351 6.8866 5.5708
C57L/J both 5.18 0.3955 5.9564 4.4036
C58/J both 3.6333 0.4169 4.4517 2.8149
CAST/EiJ both 2.455 0.3955 3.2314 1.6786
CBA/J both 8.735 0.3955 9.5114 7.9586
CE/J both 4.4299 0.4297 5.2735 3.5863
CZECHII/EiJ both 2.3478 0.4063 3.1455 1.5501
DBA/2J both 6.54 0.3955 7.3164 5.7636
FVB/NJ both 4.94 0.3955 5.7164 4.1636
I/LnJ both 3.9 0.3955 4.6764 3.1236
JF1/MsJ both 7.94 0.3955 8.7164 7.1636
KK/HlJ both 15.115 0.3955 15.8914 14.3386
LP/J both 6.805 0.3955 7.5814 6.0286
MA/MyJ both 7.6771 0.3871 8.4372 6.917
MOLF/EiJ both 2.5617 0.4063 3.3594 1.764
MSM/MsJ both 2.22 0.3955 2.9964 1.4436
NOD/ShiLtJ both 5.5338 0.4194 6.3573 4.7102
NON/ShiLtJ both 15.835 0.3955 16.6114 15.0586
NZB/BlNJ both 8.0 0.3955 8.7764 7.2236
NZW/LacJ both 7.985 0.3955 8.7614 7.2086
PERA/EiJ both 7.425 0.3955 8.2014 6.6486
PL/J both 6.425 0.3955 7.2014 5.6486
PWK/PhJ both 3.47 0.3955 4.2464 2.6936
RIIIS/J both 8.51 0.3955 9.2864 7.7336
SEA/GnJ both 6.09 0.3955 6.8664 5.3136
SJL/J both 5.34 0.3955 6.1164 4.5636
SM/J both 4.125 0.3955 4.9014 3.3486
SPRET/EiJ both 4.3822 0.4932 5.3506 3.4139
SWR/J both 3.3789 0.4063 4.1766 2.5812
WSB/EiJ both 2.72 0.3955 3.4964 1.9436




  GWAS USING LINEAR MIXED MODELS