Deprecated MPD SNP functionality

• Polymorphism of 15 Perlegen strains vs. C57BL/6J - static plots of entire chromosomes (2007, mm9)
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Archived data sets

• The CGD1 imputed SNP data set based on Perlegen/NIEHS data using a hidden Markov model, is no longer carried on MPD but is available for web query here: http://cgd.jax.org/cgdsnpdb/.
  
  
• Broad1   Daly M, Wade CM - SNP data in support of a haplotype map, 138,000+ locations for 46 inbred strains of mice (Broad1, 2006).
  
  
• Celera2   Celera / Applied Biosystems - SNP data, 2.1+ million locations for 5 inbred strains of mice (Celera2, 2006).
  
  
• IPATIMUP1   Goios A - Mitochondrial SNP data, 677 locations for 16 inbred strains of mice (IPATIMUP1, 2007).
  
  
• JAXSNP2   Petkov PM, Vonder Haar RA, Wiles MV - SNP data, 228 locations for 48 inbred strains of mice (JAXSNP2, 2004).
  
  
• JAXSNP3   Petkov PM, Vonder Haar RA, Wiles MV - SNP data, 28 locations for 96 inbred strains of mice (JAXSNP3, 2003).
  
  
• Mcminimy1   McMinimy D - Mit marker SSLP data, 560 locations for 48 inbred strains of mice (Mcminimy1, 2003).
  
  
• Merck1   Schadt EE - SNP data, 11,900+ locations for 43 inbred strains of mice (Merck1, 2006).