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Project data set: Merck1   (2006)

Project SNP data, 11,900+ locations for 43 inbred strains of mice

MPD:204     2006     Merck1     Citing

Investigators Eric E Schadt     Rosetta Inpharmatics / Merck & Company, Inc.   Seattle, WA
Contact Eric E Schadt       eric_schadt@merck.com

This data set is no longer present in MPD's online SNP query facility, but remains available as a download. Has mm9 coordinates and older annotation.

Download Merck1.csv


Changelog There have been no updates or corrections to the data set since MPD release in Oct 2007  
Notes and
funding
We thank Iris Hovatta (MRL, San Diego) and Jennifer Greenhall (UCSD) for providing the SAM DNAs, Daniel Pomp (UNC) for providing the M16 and ICR DNAs, and Richard Davis and Jake Lusis’ lab (UCLA) for providing DNAs for a number of strains. We also thank the Rosetta Gene Expression Laboratory for the microarray work.

Reference
Cervino AC, Li G, Edwards S, Zhu J, Laurie C, Tokiwa G, Lum PY, Wang S, Castellini LW, Lusis AJ, Carlson S, Sachs AB, Schadt EE. Integrating QTL and high-density SNP analyses in mice to identify Insig2 as a susceptibility gene for plasma cholesterol levels. Genomics. 2005 Nov;86(5):505-17. Epub 2005 Aug 29.     PubMed 16126366     MGI

 




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