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Project data set: Broad1   (2006)

Project SNP data in support of a haplotype map, 138,000+ locations for 46 inbred strains of mice

MPD:201     2006     Broad1     Citing

Investigators Mark Daly     Broad Institute of Harvard and MIT   Cambridge, MA
Claire M Wade     Broad Institute of Harvard and MIT   Cambridge, MA
Web site http://www.broad.mit.edu/personal/claire/MouseHapMap/
Contact Mark Daly      
  DNA obtained from The Jackson Laboratory except for strain QSi5 (E Kirk, UNSW), strain O20 (G Morahan, WEHI), and 129S4/SvJae (R Jaenisch, MIT)

This data set is no longer present in MPD's online SNP query facility, but remains available as a download. Has mm9 coordinates and older annotation.

Download Broad1.txt.gz


Changelog There have been 2 updates or corrections to the data set since MPD release in Jun 2006  
Notes and
funding
Mapping to Build 36 facilitated by B. Paigen and Y. Ding at The Jackson Laboratory.

Reference
Wade CM, Daly MJ. Genetic variation in laboratory mice. Nat Genet. 2005 Nov;37(11):1175-80.     PubMed 16254563     MGI

 




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