MPD: Data set: HMDPpheno10

Ghazalpour A, Bennett BJ, Shih D, Che N, Orozco L, Pan C, Hagopian R, He A, Kayne P, Yang WP, Kirchgessner T, Lusis AJ. Genetic regulation of mouse liver metabolite levels. Mol Syst Biol. 2014 May 23;10(5):730. doi: 10.15252/msb.20135004. PubMed 24860088

Investigators	Anatole Ghazalpour University of California, Los Angeles, Los Angeles, CA Brian J Bennett University of North Carolina, Chapel Hill, NC Luz Orozco University of California, Los Angeles, Los Angeles, CA Aldons J Lusis University of California, Los Angeles, Los Angeles, CA
Participants	Shih D, Che N, Pan C, Hagopian R, He A, Kayne P, Yang W-P
Contact	Anatole Ghazalpour aghazalp@ucla.edu Lab web site
Affiliated Center	Hybrid Mouse Diversity Panel Group (HMDP)
Part of a series:	• Metabolite survey: Amino acids see HMDPpheno6 • Metabolite survey: Carbs, cofactors, vitamins, energy, xenobiotics see HMDPpheno7 • Metabolite survey: Lipids (non-lysolipids) see HMDPpheno8 • Metabolite survey: Lipids (lysolipids) see HMDPpheno9 • Metabolite survey: Nucleotides, peptides (this project) HMDPpheno10
Project type	Phenotype strain survey data set
MPD identifiers	HMDPpheno10 MPD:505
Data changelog	No updates/corrections. Initial release date: 06/2014.
Formatted citation	Click above to copy-paste the entire citation for this MPD web page.

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)
HMDPpheno10:1	HMDPpheno10	metabolite quantification	(none)	liver methylphosphate (16h fast), relative abundance methylphosphate 50501	HMDP	106	m	16wks	N=1

HMDPpheno10:2	HMDPpheno10	metabolite quantification	(none)	liver xanthine (16h fast), relative abundance xanthine 50502	HMDP	106	m	16wks	N=1

HMDPpheno10:3	HMDPpheno10	metabolite quantification	(none)	liver xanthosine (16h fast), relative abundance xanthosine 50503	HMDP	106	m	16wks	N=1

HMDPpheno10:4	HMDPpheno10	metabolite quantification	(none)	liver 2'-deoxyinosine (16h fast), relative abundance deoxyinosine 50504	HMDP	105	m	16wks	N=1

HMDPpheno10:5	HMDPpheno10	metabolite quantification	(none)	hypoxanthine (16h fast), relative abundance hypoxanthine 50505	HMDP	106	m	16wks	N=1

HMDPpheno10:6	HMDPpheno10	metabolite quantification	(none)	inosine (16h fast), relative abundance inosine 50506	HMDP	106	m	16wks	N=1

HMDPpheno10:7	HMDPpheno10	metabolite quantification	(none)	adenine (16h fast), relative abundance adenine 50507	HMDP	105	m	16wks	N=1

HMDPpheno10:8	HMDPpheno10	metabolite quantification	(none)	adenosine (16h fast), relative abundance adenosine 50508	HMDP	106	m	16wks	N=1

HMDPpheno10:9	HMDPpheno10	metabolite quantification	(none)	liver adenosine 2'-monophosphate (2'-AMP) (16h fast), relative abundance AMP_2 50509	HMDP	106	m	16wks	N=1

HMDPpheno10:10	HMDPpheno10	metabolite quantification	(none)	liver adenosine 3'-monophosphate (3'-AMP) (16h fast), relative abundance AMP_3 50510	HMDP	106	m	16wks	N=1

HMDPpheno10:11	HMDPpheno10	metabolite quantification	(none)	liver adenosine 5'-monophosphate (AMP) (16h fast), relative abundance AMP_5 50511	HMDP	106	m	16wks	N=1

HMDPpheno10:12	HMDPpheno10	metabolite quantification	(none)	liver N1-methyladenosine (16h fast), relative abundance methyladenosine 50512	HMDP	106	m	16wks	N=1

HMDPpheno10:13	HMDPpheno10	metabolite quantification	(none)	liver guanosine (16h fast), relative abundance guanosine 50513	HMDP	99	m	16wks	N=1

HMDPpheno10:14	HMDPpheno10	metabolite quantification	(none)	liver allantoin (16h fast), relative abundance allantoin 50514	HMDP	106	m	16wks	N=1

HMDPpheno10:15	HMDPpheno10	metabolite quantification	(none)	liver cytidine 5'-monophosphate (5'-CMP) (16h fast), relative abundance CMP_5 50515	HMDP	106	m	16wks	N=1

HMDPpheno10:16	HMDPpheno10	metabolite quantification	(none)	cytidine (16h fast), relative abundance cytidine 50516	HMDP	106	m	16wks	N=1

HMDPpheno10:17	HMDPpheno10	metabolite quantification	(none)	thymine (16h fast), relative abundance thymine 50517	HMDP	106	m	16wks	N=1

HMDPpheno10:18	HMDPpheno10	metabolite quantification	(none)	3-aminoisobutyrate (16h fast), relative abundance aminoisobutyrate 50518	HMDP	106	m	16wks	N=1

HMDPpheno10:19	HMDPpheno10	metabolite quantification	(none)	uracil (16h fast), relative abundance uracil 50519	HMDP	106	m	16wks	N=1

HMDPpheno10:20	HMDPpheno10	metabolite quantification	(none)	5-methyluridine (ribothymidine) (16h fast), relative abundance methyluridine 50520	HMDP	100	m	16wks	N=1

HMDPpheno10:21	HMDPpheno10	metabolite quantification	(none)	pseudouridine (16h fast), relative abundance pseudouridine 50521	HMDP	106	m	16wks	N=1

HMDPpheno10:22	HMDPpheno10	metabolite quantification	(none)	uridine (16h fast), relative abundance uridine 50522	HMDP	106	m	16wks	N=1

HMDPpheno10:23	HMDPpheno10	metabolite quantification	(none)	glycylglycine (16h fast), relative abundance glycylglycine 50523	HMDP	102	m	16wks	N=1

HMDPpheno10:24	HMDPpheno10	metabolite quantification	(none)	glycylisoleucine (16h fast), relative abundance glycylisoleucine 50524	HMDP	92	m	16wks	N=1

HMDPpheno10:25	HMDPpheno10	metabolite quantification	(none)	glycylleucine (16h fast), relative abundance glycylleucine 50525	HMDP	106	m	16wks	N=1

HMDPpheno10:26	HMDPpheno10	metabolite quantification	(none)	glycylproline (16h fast), relative abundance glycylproline 50526	HMDP	106	m	16wks	N=1

HMDPpheno10:27	HMDPpheno10	metabolite quantification	(none)	glycylvaline (16h fast), relative abundance glycylvaline 50527	HMDP	105	m	16wks	N=1

HMDPpheno10:28	HMDPpheno10	metabolite quantification	(none)	gamma-glutamylglutamate (16h fast), relative abundance GGG 50528	HMDP	106	m	16wks	N=1

HMDPpheno10:29	HMDPpheno10	metabolite quantification	(none)	gamma-glutamylisoleucine (16h fast), relative abundance GGI 50529	HMDP	95	m	16wks	N=1

HMDPpheno10:30	HMDPpheno10	metabolite quantification	(none)	gamma-glutamylleucine (16h fast), relative abundance GGL 50530	HMDP	106	m	16wks	N=1

HMDPpheno10:31	HMDPpheno10	metabolite quantification	(none)	gamma-glutamylthreonine (16h fast), relative abundance GGT 50531	HMDP	104	m	16wks	N=1

HMDPpheno10:32	HMDPpheno10	metabolite quantification	(none)	gamma-glutamylvaline (16h fast), relative abundance GGV 50532	HMDP	106	m	16wks	N=1

HMDPpheno10: Liver metabolite levels: Nucleotides and peptides in males of 104 strains of the Hybrid Mouse Diversity Panel (HMDP) (2014)