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MPD - Phenotype data: high-fat diet
high-fat diet  
Measurements:


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BALB/cByJ
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blood — clinical chemistry — enzymes — ALT         metabolic panel  
Rusyn5
serum alanine aminotransferase (ALT) [IU/L]   high-fat diet, ethanol
      • high-fat only  ...... 15.6 (N=3)  
      • high-fat and ethanol  ...... 82.1 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
blood — clinical chemistry — glucose         metabolic panel  
Naggert1
glucose (plasma GLU, 4h fast) [mg/dL]     baseline and  high-fat diet 17wks
      • baseline  ...... 183   167  
      • after 17wks on diet  ...... 137   136  
      • Δchange  ...... 0.750   0.869  
        • comparison  
43 strains   age 7-9wks
                at baseline

  Inbred
 
blood — clinical chemistry — proteins — misc         HPLC  
Rusyn5
homocysteine concentration (plasma) [nmol/mL]   high-fat diet, ethanol
      • high-fat only  ...... 4.70 (N=3)  
      • high-fat and ethanol  ...... 18.7 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
blood — lipids — cholesterol — HDL         lipid profile  
Paigen2
HDL cholesterol [mg/dL]     baseline and  high-fat diet 17wks
      • baseline  ...... 56.8   86.7  
      • after 17wks on diet  ...... 76.5   95.1  
      • Δchange  ...... 1.45   1.17  
        • comparison  
43 strains   age 7-9wks
                at baseline

  Inbred
 
blood — lipids — cholesterol — LDL or non-HDL         lipid profile  
Paigen2
non-HDL cholesterol [mg/dL]     baseline and  high-fat diet 17wks
      • baseline  ...... 23.9   12.4  
      • after 17wks on diet  ...... 89.6   99.4  
      • Δchange  ...... 4.56   4.35  
        • comparison  
43 strains   age 7-9wks
                at baseline

  Inbred
 
blood — lipids — cholesterol — total         lipid profile  
Paigen2
total cholesterol [mg/dL]     baseline and  high-fat diet 17wks
      • baseline  ...... 78.7   92.6  
      • after 17wks on diet  ...... 166   194  
      • Δchange  ...... 2.25   2.17  
        • comparison  
43 strains   age 7-9wks
                at baseline

  Inbred
 
blood — lipids — triglycerides         lipid profile  
Paigen2
triglycerides [mg/dL]     baseline and  high-fat diet 17wks
      • baseline  ...... 140   117  
      • after 17wks on diet  ...... 36.3   64.8  
      • Δchange  ...... 0.266   0.490  
        • comparison  
43 strains   age 7-9wks
                at baseline

  Inbred
 
blood — xenobiotics — alcohol concentration         spectrophotometry  
Rusyn5
blood alcohol concentration (BAC) [mg/dL]   high-fat diet, ethanol
      • high-fat only  ...... 31.5 (N=3)  
      • high-fat and ethanol  ...... 385 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
body composition — fat — percent         DXA  
Naggert1
percent of tissue mass that is fat, head excluded   [%] ...... 19.7     high-fat diet   8wks
43 strains   age 15-17wks
  Inbred
 
body composition — fat — weight         DXA  
Naggert1
weight of fat portion of tissue mass, head excluded   [g] ...... 5.56     high-fat diet   8wks
43 strains   age 15-17wks
  Inbred
 
body composition — lean         DXA  
Naggert1
weight of lean portion of tissue mass, head excluded   [g] ...... 22.5     high-fat diet   8wks
43 strains   age 15-17wks
  Inbred
 
body composition — total         DXA  
Naggert1
total tissue mass, head excluded   [g] ...... 28.1     high-fat diet   8wks
43 strains   age 15-17wks
  Inbred
 
body weight         scales  
Naggert1
body weight   [g] ...... 28.3     high-fat diet   8wks
43 strains   age 15-17wks
  Inbred
 
bone — mineral density and content — whole body without head         DXA  
Naggert1
bone mineral density and content   high-fat diet   8wks
      • BMD  ...... 0.0504  
      • BMC  ...... 0.485  
     
43 strains   age 15-17wks
  Inbred
 
cardiovascular — atherosclerosis         histopathology  
Paigen2
fatty streak aortic lesion size   [µm2] ...... 409   288     high-fat diet   17wks
43 strains   age 25-27wks
  Inbred
 
endocrine — hormones — insulin         ELISA  
Naggert1
insulin   [ng/mL] ...... 1.48   1.51     high-fat diet   18wks
43 strains   age 25-27wks
  Inbred
 
endocrine — hormones — leptin         ELISA  
Naggert1
leptin   [pg/mL] ...... 5834   2132     high-fat diet   18wks
43 strains   age 25-27wks
  Inbred
 
kidney — function — urinalysis         spectrophotometry  
Rusyn5
urine alcohol concentration (UAC), daily average [mg/dL]   high-fat diet, ethanol
      • high-fat only  ...... 17.4 (N=3)  
      • high-fat and ethanol  ...... 130 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
urine alcohol concentration (UAC), daily peak [mg/dL]   high-fat diet, ethanol
      • high-fat only  ...... 51.0 (N=3)  
      • high-fat and ethanol  ...... 348 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
liver — gene expression         RT-PCR  
Rusyn5
Acox1 [%]   high-fat diet, ethanol   gene: Acox1  
      • high-fat only  ......
      • high-fat and ethanol  ......
        • comparison  
6 strains   age 8-14wks
  Inbred
Rusyn5
Adipor2 [%]   high-fat diet, ethanol   gene: Adipor2  
      • high-fat only  ......
      • high-fat and ethanol  ......
        • comparison  
6 strains   age 8-14wks
  Inbred
Rusyn5
Ahcy [%]   high-fat diet, ethanol   gene: Ahcy  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 89.5 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Cbs [%]   high-fat diet, ethanol   gene: Cbs  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 51.4 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Cebpa [%]   high-fat diet, ethanol   gene: Cebpa  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 53.6 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Cth [%]   high-fat diet, ethanol   gene: Cth  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 106 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Ddit3 (Chop) [%]   high-fat diet, ethanol   gene: Ddit3  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 57.4 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Gnmt [%]   high-fat diet, ethanol   gene: Gnmt  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 89.6 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Mat1a [%]   high-fat diet, ethanol   gene: Mat1a  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 123 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Mthfr [%]   high-fat diet, ethanol   gene: Mthfr  
      • high-fat only  ...... 100.0 (N=3)  
      • high-fat and ethanol  ...... 24.3 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Mtr [%]   high-fat diet, ethanol   gene: Mtr  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 54.6 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Mttp [%]   high-fat diet, ethanol   gene: Mttp  
      • high-fat only  ......
      • high-fat and ethanol  ......
        • comparison  
6 strains   age 8-14wks
  Inbred
Rusyn5
Srebf1 [%]   high-fat diet, ethanol   gene: Srebf1  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 53.6 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
liver — lipid homeostasis         lipid profile  
Rusyn5
hepatic triglycerides (TG) [mg/g]   high-fat diet, ethanol
      • high-fat only  ......
      • high-fat and ethanol  ......
        • comparison  
6 strains   age 8-14wks
  Inbred
 
liver — pathology         histopathology  
Rusyn5
liver steatosis (0-4) [score]   high-fat diet, ethanol
      • high-fat only  ...... 0.167 (N=3)  
      • high-fat and ethanol  ...... 2.33 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
liver inflammation (0-2) [score]   high-fat diet, ethanol
      • high-fat only  ...... 0.667 (N=3)  
      • high-fat and ethanol  ...... 0.667 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
liver necrosis (0-2) [score]   high-fat diet, ethanol
      • high-fat only  ...... 0 (N=3)  
      • high-fat and ethanol  ...... 0.667 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
total liver histopathology (0-8) [score]   high-fat diet, ethanol
      • high-fat only  ...... 0.833 (N=3)  
      • high-fat and ethanol  ...... 3.67 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
liver — protein homeostasis         HPLC  
Rusyn5
liver homocysteine [nmol/mg]   high-fat diet, ethanol
      • high-fat only  ...... 0.247 (N=3)  
      • high-fat and ethanol  ...... 0.327 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
liver S-adenosylhomocysteine (SAH) [nmol/mg]   high-fat diet, ethanol
      • high-fat only  ...... 0.303 (N=3)  
      • high-fat and ethanol  ...... 0.350 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
liver methionine [nmol/mg]   high-fat diet, ethanol
      • high-fat only  ...... 0.643 (N=3)  
      • high-fat and ethanol  ...... 0.417 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
liver S-adenosylmethionine (SAM) [nmol/mg]   high-fat diet, ethanol
      • high-fat only  ...... 0.553 (N=3)  
      • high-fat and ethanol  ...... 0.470 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
ratio of liver SAM to SAH (SAM/SAH) [ratio]   high-fat diet, ethanol
      • high-fat only  ...... 1.84 (N=3)  
      • high-fat and ethanol  ...... 1.36 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
liver — protein homeostasis         Western blot  
Rusyn5
BHMT [%]   high-fat diet, ethanol   gene: Bhmt  
      • high-fat only  ...... 100 (N=2)  
      • high-fat and ethanol  ...... 81.3 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
DDIT3 (CHOP) [%]   high-fat diet, ethanol   gene: Ddit3  
      • high-fat only  ...... 100 (N=2)  
      • high-fat and ethanol  ...... 102 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
HSPA5 (GRP78) [%]   high-fat diet, ethanol   gene: Hspa5  
      • high-fat only  ...... 100 (N=2)  
      • high-fat and ethanol  ...... 126 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
SREBF1 (NSREBP1) [%]   high-fat diet, ethanol   gene: Srebf1  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 92.0 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
liver — protein homeostasis — glutathione         HPLC  
Rusyn5
reduced liver glutathione (GSH) [nmol/mg]   high-fat diet, ethanol
      • high-fat only  ...... 48.3 (N=3)  
      • high-fat and ethanol  ...... 26.7 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
oxidized liver glutathione (GSSG) [nmol/mg]   high-fat diet, ethanol
      • high-fat only  ...... 2.34 (N=3)  
      • high-fat and ethanol  ...... 2.97 (N=3) ▲▲  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
ratio of reduced to oxidized liver glutathione [ratio]   high-fat diet, ethanol
      • high-fat only  ...... 20.8 (N=3)  
      • high-fat and ethanol  ...... 9.43 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
liver — weight         scales  
Rusyn5
liver weight as a percent of body weight [%]   high-fat diet, ethanol
      • high-fat only  ...... 6.45 (N=3)  
      • high-fat and ethanol  ...... 7.91 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred


 


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