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MPD - Phenotype data: high-fat diet
high-fat diet  
Measurements:


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blood — clinical chemistry — enzymes — ALT         metabolic panel  
Paigen1
alanine aminotransferase (plasma ALT)   [IU/L] ...... 162   520 ▲▲     high-fat diet   8wks
43 strains   age 15-19wks
  Inbred
Rusyn5
serum alanine aminotransferase (ALT) [IU/L]   high-fat diet, ethanol
      • high-fat only  ...... 43.9 (N=3)  
      • high-fat and ethanol  ...... 46.2 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
blood — clinical chemistry — glucose         metabolic panel  
Naggert1
glucose (plasma GLU, 4h fast) [mg/dL]     baseline and  high-fat diet 17wks
      • baseline  ...... 108 ▼▼   144  
      • after 17wks on diet  ...... 127   105  
      • Δchange  ...... 1.68 ▲▲   0.677  
        • comparison  
43 strains   age 7-9wks
                at baseline

  Inbred
 
blood — clinical chemistry — miscellaneous         metabolic panel  
Paigen1
bile salts (plasma)   [µmol/L] ...... 57.0   72.3     high-fat diet   8wks
43 strains   age 15-19wks
  Inbred
 
blood — clinical chemistry — proteins — misc         HPLC  
Rusyn5
homocysteine concentration (plasma) [nmol/mL]   high-fat diet, ethanol
      • high-fat only  ...... 2.89 (N=2)  
      • high-fat and ethanol  ...... 8.29 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
blood — lipids — cholesterol — HDL         lipid profile  
Paigen1
HDL cholesterol (plasma)   high-fat diet   8wks
      • amount  ...... 48.2   88.0  
      • % of total plasma cholesterol  ...... 22.3   37.2  
     
43 strains   age 15-19wks
  Inbred
Paigen2
HDL cholesterol [mg/dL]     baseline and  high-fat diet 17wks
      • baseline  ...... 66.5   92.3  
      • after 17wks on diet  ...... 92.8   96.0  
      • Δchange  ...... 1.42   1.02  
        • comparison  
43 strains   age 7-9wks
                at baseline

  Inbred
 
blood — lipids — cholesterol — LDL or non-HDL         lipid profile  
Paigen1
plasma cholesterol not in the HDL fraction   [mg/dL] ...... 185   149     high-fat diet   8wks
43 strains   age 15-19wks
  Inbred
Paigen2
non-HDL cholesterol [mg/dL]     baseline and  high-fat diet 17wks
      • baseline  ...... 8.62   10.6  
      • after 17wks on diet  ...... 190   148  
      • Δchange  ...... 50.2 ▲▲   28.6  
        • comparison  
43 strains   age 7-9wks
                at baseline

  Inbred
 
blood — lipids — cholesterol — total         lipid profile  
Paigen1
total cholesterol (plasma)   [mg/dL] ...... 235   237     high-fat diet   8wks
43 strains   age 15-19wks
  Inbred
Paigen2
total cholesterol [mg/dL]     baseline and  high-fat diet 17wks
      • baseline  ...... 68.2   102  
      • after 17wks on diet  ...... 282   244  
      • Δchange  ...... 7.44   2.34  
        • comparison  
43 strains   age 7-9wks
                at baseline

  Inbred
 
blood — lipids — triglycerides         lipid profile  
Paigen2
triglycerides [mg/dL]     baseline and  high-fat diet 17wks
      • baseline  ...... 79.9   93.9  
      • after 17wks on diet  ...... 82.6   62.1  
      • Δchange  ...... 1.08   0.818  
        • comparison  
43 strains   age 7-9wks
                at baseline

  Inbred
 
blood — xenobiotics — alcohol concentration         spectrophotometry  
Rusyn5
blood alcohol concentration (BAC) [mg/dL]   high-fat diet, ethanol
      • high-fat only  ...... 52.5 (N=3)  
      • high-fat and ethanol  ...... 92.8 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
body composition — fat — percent         DXA  
Naggert1
percent of tissue mass that is fat, head excluded   [%] ...... 13.7   10.8     high-fat diet   8wks
43 strains   age 15-17wks
  Inbred
 
body composition — fat — weight         DXA  
Naggert1
weight of fat portion of tissue mass, head excluded   [g] ...... 1.71   1.58     high-fat diet   8wks
43 strains   age 15-17wks
  Inbred
 
body composition — lean         DXA  
Naggert1
weight of lean portion of tissue mass, head excluded   [g] ...... 10.8   13.0     high-fat diet   8wks
43 strains   age 15-17wks
  Inbred
 
body composition — total         DXA  
Naggert1
total tissue mass, head excluded   [g] ...... 12.5   14.6     high-fat diet   8wks
43 strains   age 15-17wks
  Inbred
 
body weight         scales  
Naggert1
body weight   [g] ...... 13.3   15.3     high-fat diet   8wks
43 strains   age 15-17wks
  Inbred
Paigen1
body weight [g]     baseline and  high-fat diet 8wks
      • start  ......
      • after 8wks on diet  ...... 11.7 ▼▼   14.3 ▼▼  
      • Δchange  ......
        • comparison  
43 strains   age 7-11wks
                at baseline

  Inbred
 
bone — mineral density and content — whole body without head         DXA  
Naggert1
bone mineral density and content   high-fat diet   8wks
      • BMD  ...... 0.0399   0.0411  
      • BMC  ...... 0.300   0.341  
     
43 strains   age 15-17wks
  Inbred
 
cardiovascular — atherosclerosis         histopathology  
Paigen1
fatty streak aortic lesion size   [µm2] ...... 0   0     high-fat diet   8wks
43 strains   age 15-19wks
  Inbred
Paigen2
fatty streak aortic lesion size   [µm2] ...... 47.2   0     high-fat diet   17wks
43 strains   age 25-27wks
  Inbred
 
endocrine — hormones — insulin         ELISA  
Naggert1
insulin   [ng/mL] ...... 0.790   0.804     high-fat diet   18wks
43 strains   age 25-27wks
  Inbred
 
endocrine — hormones — leptin         ELISA  
Naggert1
leptin   [pg/mL] ...... 3581   2404     high-fat diet   18wks
43 strains   age 25-27wks
  Inbred
 
gallbladder — pathology and gallstones         gravimetry  
Paigen1
gallbladder volume   [µL] ...... 2.31   1.58     high-fat diet   8wks
43 strains   age 15-19wks
  Inbred
 
gallbladder — pathology and gallstones         histopathology  
Paigen1
gallbladder pathology (0-4) [score]   high-fat diet   8wks
      • mucin  ...... 2.25   2.60  
      • arc  ...... 0   0  
      • filaments  ...... 0   0  
     
      liquid crystals:
            • small  ...... 1.19   1.17  
            • aggregated  ...... 0.625   0.833  
            • fused  ...... 0.500   0.667  
              • comparison  
      cholesterol monohydrate crystals:
            • all  ...... 0.688   0.917  
           
43 strains   age 15-19wks
  Inbred
Paigen1
gallstones [n]   high-fat diet   8wks
      • sandy  ...... 0.500   0.167  
      • true  ...... 0   0  
      • all  ...... 0.500   0.167  
      • presence score [0/1]  ...... 0.250   0.167  
        • comparison  
43 strains   age 15-19wks
  Inbred
 
kidney — function — urinalysis         spectrophotometry  
Rusyn5
urine alcohol concentration (UAC), daily average [mg/dL]   high-fat diet, ethanol
      • high-fat only  ...... 31.3 (N=3)  
      • high-fat and ethanol  ...... 146 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
urine alcohol concentration (UAC), daily peak [mg/dL]   high-fat diet, ethanol
      • high-fat only  ...... 95.1 (N=3)  
      • high-fat and ethanol  ...... 395 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
liver — gene expression         RT-PCR  
Rusyn5
Acox1 [%]   high-fat diet, ethanol   gene: Acox1  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 96.4 (N=3)  
        • comparison  
6 strains   age 8-14wks
  Inbred
Rusyn5
Adipor2 [%]   high-fat diet, ethanol   gene: Adipor2  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 155 (N=3)  
        • comparison  
6 strains   age 8-14wks
  Inbred
Rusyn5
Ahcy [%]   high-fat diet, ethanol   gene: Ahcy  
      • high-fat only  ...... 100.0 (N=3)  
      • high-fat and ethanol  ...... 187 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Cbs [%]   high-fat diet, ethanol   gene: Cbs  
      • high-fat only  ...... 100.0 (N=3)  
      • high-fat and ethanol  ...... 113 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Cebpa [%]   high-fat diet, ethanol   gene: Cebpa  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 411 (N=3) ▲▲  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Cth [%]   high-fat diet, ethanol   gene: Cth  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 211 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Ddit3 (Chop) [%]   high-fat diet, ethanol   gene: Ddit3  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 120 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Gnmt [%]   high-fat diet, ethanol   gene: Gnmt  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 205 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Mat1a [%]   high-fat diet, ethanol   gene: Mat1a  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 197 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Mthfr [%]   high-fat diet, ethanol   gene: Mthfr  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 119 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Mtr [%]   high-fat diet, ethanol   gene: Mtr  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 98.5 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
Mttp [%]   high-fat diet, ethanol   gene: Mttp  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 141 (N=3)  
        • comparison  
6 strains   age 8-14wks
  Inbred
Rusyn5
Srebf1 [%]   high-fat diet, ethanol   gene: Srebf1  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 154 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
liver — lipid homeostasis         lipid profile  
Paigen1
hepatic cholesterol concentration [mg]   high-fat diet   8wks
      • free  ...... 7.95 ▲▲   7.92  
      • esterified  ...... 61.7   59.3 ▲▲  
      • total  ...... 71.6 ▲▲   67.3 ▲▲  
      • free to esterified ratio  ...... 0.130   0.133  
     
43 strains   age 15-19wks
  Inbred
Rusyn5
hepatic triglycerides (TG) [mg/g]   high-fat diet, ethanol
      • high-fat only  ...... 4.79 (N=3)  
      • high-fat and ethanol  ...... 17.4 (N=3)  
        • comparison  
6 strains   age 8-14wks
  Inbred
 
liver — pathology         histopathology  
Paigen1
liver pathology (0-4) [score]   high-fat diet   8wks
      • images  ......
      • microvacuoles  ...... 3.00 (N=3)   1.67 (N=3)  
      • macrovacuoles  ...... 0 (N=3)   0 (N=3)  
      • inflammation  ...... 0.333 (N=3)   0.667 (N=3)  
     
43 strains   age 15-19wks
  Inbred
Rusyn5
liver steatosis (0-4) [score]   high-fat diet, ethanol
      • high-fat only  ...... 0 (N=3)  
      • high-fat and ethanol  ...... 0.833 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
liver inflammation (0-2) [score]   high-fat diet, ethanol
      • high-fat only  ...... 1.00 (N=3)  
      • high-fat and ethanol  ...... 1.00 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
liver necrosis (0-2) [score]   high-fat diet, ethanol
      • high-fat only  ...... 0 (N=3)  
      • high-fat and ethanol  ...... 0 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
total liver histopathology (0-8) [score]   high-fat diet, ethanol
      • high-fat only  ...... 1.00 (N=3)  
      • high-fat and ethanol  ...... 1.83 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
liver — protein homeostasis         HPLC  
Rusyn5
liver homocysteine [nmol/mg]   high-fat diet, ethanol
      • high-fat only  ...... 0.177 (N=3)  
      • high-fat and ethanol  ...... 0.240 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
liver S-adenosylhomocysteine (SAH) [nmol/mg]   high-fat diet, ethanol
      • high-fat only  ...... 0.223 (N=3)  
      • high-fat and ethanol  ...... 0.287 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
liver methionine [nmol/mg]   high-fat diet, ethanol
      • high-fat only  ...... 0.720 (N=3)  
      • high-fat and ethanol  ...... 0.487 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
liver S-adenosylmethionine (SAM) [nmol/mg]   high-fat diet, ethanol
      • high-fat only  ...... 0.600 (N=3)  
      • high-fat and ethanol  ...... 0.547 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
ratio of liver SAM to SAH (SAM/SAH) [ratio]   high-fat diet, ethanol
      • high-fat only  ...... 2.68 (N=3)  
      • high-fat and ethanol  ...... 1.90 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
liver — protein homeostasis         Western blot  
Rusyn5
BHMT [%]   high-fat diet, ethanol   gene: Bhmt  
      • high-fat only  ...... 100 (N=2)  
      • high-fat and ethanol  ...... 89.4 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
DDIT3 (CHOP) [%]   high-fat diet, ethanol   gene: Ddit3  
      • high-fat only  ...... 100 (N=2)  
      • high-fat and ethanol  ...... 105 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
HSPA5 (GRP78) [%]   high-fat diet, ethanol   gene: Hspa5  
      • high-fat only  ...... 100 (N=2)  
      • high-fat and ethanol  ...... 72.3 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
SREBF1 (NSREBP1) [%]   high-fat diet, ethanol   gene: Srebf1  
      • high-fat only  ...... 100 (N=3)  
      • high-fat and ethanol  ...... 115 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
liver — protein homeostasis — glutathione         HPLC  
Rusyn5
reduced liver glutathione (GSH) [nmol/mg]   high-fat diet, ethanol
      • high-fat only  ...... 43.7 (N=3)  
      • high-fat and ethanol  ...... 36.2 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
oxidized liver glutathione (GSSG) [nmol/mg]   high-fat diet, ethanol
      • high-fat only  ...... 2.18 (N=3)  
      • high-fat and ethanol  ...... 2.80 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
Rusyn5
ratio of reduced to oxidized liver glutathione [ratio]   high-fat diet, ethanol
      • high-fat only  ...... 21.9 (N=3)  
      • high-fat and ethanol  ...... 12.9 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred
 
liver — weight         scales  
Paigen1
liver weight at sacrifice   [g] ...... 0.805   1.02     high-fat diet   8wks
43 strains   age 15-19wks
  Inbred
Rusyn5
liver weight as a percent of body weight [%]   high-fat diet, ethanol
      • high-fat only  ...... 5.25 (N=3)  
      • high-fat and ethanol  ...... 6.55 (N=3)  
        • comparison  
14 strains   age 8-14wks
  Inbred


128 measurements listed.

 


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