Home       About             Help      

Genes and markers >
Gene or marker: Pcdhgb5

Note: Current MGI location for Pcdhgb5 shown below differs by 215012 bp
from GX platform annotated bp location on previous page (18:37946166).

Name / description Pcdhgb5   protocadherin gamma subfamily B, 5         MGI   GO
Feature typeprotein coding gene
Chr location 18:37731154-37841870     strand +     size 110716 bp   (GRCm38)
Nearby genes and markers
within ± 2000 bp
Symbol Distance(bp) StrandSize(bp)Linkouts
Pcdhga1 overlap + 179925 MGI   GO
Pcdhga2 overlap + 172765 MGI   GO
Pcdhga3 overlap + 167538 MGI   GO
Pcdhgb1 overlap + 161412 MGI   GO
Pcdhga4 overlap + 156470 MGI   GO
Pcdhgb2 overlap + 152013 MGI   GO
Pcdhga5 overlap + 147369 MGI   GO
Pcdhga6 overlap + 134641 MGI   GO
Pcdhga7 overlap + 127039 MGI   GO
Pcdhgb4 overlap + 121316 MGI   GO
Pcdhga8 overlap + 116167 MGI   GO
Pcdhga9 overlap + 104927 MGI   GO
Pcdhgb6 overlap + 99779 MGI   GO
Pcdhga10 overlap + 94682 MGI   GO
Pcdhgb7 overlap + 90091 MGI   GO
Pcdhga11 overlap + 86100 MGI   GO
Pcdhgb8 overlap + 80072 MGI   GO
Pcdhga12 overlap + 76293 MGI   GO
BC037039 overlap 2204 MGI   GO
Pcdhgc3 overlap + 35463 MGI   GO
Pcdhgc4 overlap + 26794 MGI   GO
Pcdhgc5 overlap + 22327 MGI   GO
Diap1 1731   dn 91875 MGI   GO

List markers within ± 50,000 bp

SNPs and variation
data in MPD


• List SNPs/variation in Pcdhgb5 vicinity
• Strain polymorphism in Pcdhgb5 vicinity

Gene expression
strain survey data
in MPD

• Probesets in Pcdhgb5 vicinity
• Phenotypes mathematically correlated to Pcdhgb5 probesets
• Strain outliers

Linkouts to
other resources
for Pcdhgb5

• MGI         • GO         • MGI GBrowse
• Ensembl     • BioGPS
• IMPC       • IKMC       • GeneCloud
• Find associated mouse strains (IMSR)

 
To find another gene, enter symbol in search box (upper right).
Source for gene coordinates and nomenclature is MGI.

Video tutorial session 14 demonstrates the use of this page.

 




Hosted by:
  Contact us
About MPD
Also at JAX
  Units
Changelog
Downloads
  Citing
Funding
Terms of Use