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Probesets correlated to selected phenotype measurement

Your selected phenotype measurement:          
brain — cerebral cortex — biochemical analytes         reverse ELISA  
Wiltshire3
PTH_cont   parathyroid hormone (PTH), relative fluorescence intensity
30 strains   age 10-11wks
  Inbred

List correlations where p ≤   and   DPV[1]    
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Mathematical correlation with this phenotype Gene expression probeset data instance
PearsonSexNo. of
Strains		Scatter
plot		 Gene
Collect all 		Approximate
chr loc		 Probeset Data set
r = –0.857   p = 0.000011 m 17 Plot Abcc5 16:20400927 1435685_x_at macrophage_HMDP_Oro3_OxPAPC
r = –0.787   p = 0.000014 m 22 Plot Sfpi1 2:91095843 1418747_at macrophage_HMDP_Oro2_LPS
r = 0.956   p = 0.000016 m 10 Plot Rad51c 11:87378753 A_51_P237512 liver_Rusyn3_ctrl
r = –0.783   p = 0.000017 m 22 Plot Pcdh10 3:45379078 1425563_s_at macrophage_HMDP_Oro1_ctrl
r = 0.950   p = 0.000025 m 10 Plot 19:43587947 A_51_P295575 liver_Rusyn3_ctrl
r = –0.752   p = 0.000054 m 22 Plot Sfpi1 2:91095843 1418747_at macrophage_HMDP_Oro1_ctrl
r = 0.738   p = 0.000059 m 23 Plot 15:62980445 1417004_at liver_HMDP_Lusis1
r = –0.818   p = 0.000060 m 17 Plot Avpr1b 1:131599423 1422204_at macrophage_HMDP_Oro3_OxPAPC
r = 0.935   p = 0.000073 m 10 Plot Eps15 4:109360272 A_52_P118706 liver_Rusyn3_ctrl
r = –0.741   p = 0.000081 m 22 Plot 1:163244869 1425526_a_at macrophage_HMDP_Oro2_LPS
r = –0.735   p = 0.000096 m 22 Plot H2-K1 17:33996055 1452544_x_at macrophage_HMDP_Oro2_LPS
[11 instances listed above]


Correlations with r < 0.5 or p > 0.005 or nstrains < 10 are not retained.

The large number of eligible probeset data instances increases the liklihood of strong mathematical correlations occurring by chance.

[1] DPV = data point variance filter. Stricter settings will omit instances where data points have more variance. To see DPV hover your mouse pointer over the p value.

 




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