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Probesets correlated to selected phenotype measurement

Your selected phenotype measurement:          
liver — mineral homeostasis         mass spectrometry  
Vulpe1
copper   copper (Cu) content in liver (dry weight)   [µg/g]
18 strains   age 8wks
  Inbred

List correlations where p ≤   and   DPV[1]    
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Mathematical correlation with this phenotype Gene expression probeset data instance
PearsonSexNo. of
Strains		Scatter
plot		 Gene
Collect all 		Approximate
chr loc		 Probeset Data set
r = 0.962   p = 0.000002 f 11 Plot Chst8 7:34743590 10024398092 liver_Su1
r = –0.954   p = 0.000005 m 11 Plot Esrrb 12:86441371 10028671328 liver_Su1
r = 0.966   p = 0.000006 m 10 Plot Fam20a 11:109700501 A_51_P432180 liver_Gatti1
r = –0.957   p = 0.000014 m 10 Plot 6:116728892 A_51_P316935 liver_Gatti1
r = –0.954   p = 0.000018 m 10 Plot Ppp2r4 2:30433856 A_51_P357606 liver_Gatti1
r = –0.951   p = 0.000024 m 10 Plot 10:112994758 A_51_P176783 liver_Gatti1
r = 0.935   p = 0.000024 m 11 Plot Cacna2d2 9:107464396 10018185474 liver_Su1
r = 0.933   p = 0.000027 m 11 Plot 13:106946920 1426291_at liver_HMDP_Lusis1
r = –0.949   p = 0.000028 m 10 Plot 7:95431790 A_51_P231128 liver_Gatti1
r = 0.931   p = 0.000032 m 11 Plot Mapk13 17:28774003 10018194972 liver_Su1
r = 0.929   p = 0.000036 m 11 Plot Tmem104 11:115217255 10018193386 liver_Su1
r = 0.943   p = 0.000042 m 10 Plot Srgap2 1:131333752 A_51_P283224 liver_Gatti1
r = –0.923   p = 0.000052 m 11 Plot Atf2 2:73854574 10024397120 liver_Su1
r = 0.938   p = 0.000058 m 10 Plot 7:16905567 A_51_P136542 liver_Gatti1
r = –0.921   p = 0.000058 m 11 Plot Olfr1136 2:87693414 10028675807 liver_Su1
r = –0.937   p = 0.000064 m 10 Plot 11:101136038 A_51_P201480 liver_Gatti1
r = –0.919   p = 0.000064 m 11 Plot Hacl1 14:31620008 10018187601 liver_Su1
r = 0.937   p = 0.000065 m 10 Plot 9:38716456 A_51_P212771 liver_Gatti1
r = –0.936   p = 0.000067 m 10 Plot 5:90453063 A_51_P363187 liver_Gatti1
r = –0.935   p = 0.000071 m 10 Plot 13:114799131 A_51_P130660 liver_Gatti1
r = 0.935   p = 0.000074 m 10 Plot Gm15943 15:58282256 A_51_P388964 liver_Gatti1
r = 0.916   p = 0.000074 m 11 Plot Gm3448 17:14996036 1421682_a_at liver_HMDP_Lusis1
r = 0.916   p = 0.000074 m 11 Plot Clec9a 6:129416812 10024414951 liver_Su1
r = –0.916   p = 0.000075 m 11 Plot 10:63099252 1422929_s_at liver_HMDP_Lusis1
r = 0.915   p = 0.000079 m 11 Plot Metrnl 11:121708925 10024409229 liver_Su1
r = 0.933   p = 0.000082 m 10 Plot 2:177154205 A_51_P283292 liver_Gatti1
r = 0.932   p = 0.000086 m 10 Plot Abcg1 17:31070230 A_51_P345100 liver_Gatti1
r = 0.932   p = 0.000086 m 10 Plot 19:12369138 A_51_P378967 liver_Gatti1
r = 0.931   p = 0.000089 m 10 Plot Gm21264 2:72492183 A_51_P202857 liver_Gatti1
r = –0.931   p = 0.000090 m 10 Plot 8:42941629 A_51_P502119 liver_Gatti1
r = 0.912   p = 0.000091 m 11 Plot Hnrnpa3 2:75665943 1452712_at liver_HMDP_Lusis1
r = –0.911   p = 0.000095 m 11 Plot 3:105764809 10024405433 liver_Su1
r = –0.930   p = 0.000096 m 10 Plot Lmf2 15:89352098 A_51_P340947 liver_Gatti1
r = –0.911   p = 0.000096 m 11 Plot Rara 11:98937686 1450180_a_at liver_HMDP_Lusis1
r = –0.911   p = 0.000097 f 11 Plot Got2 8:95876340 10018180778 liver_Su1
r = –0.911   p = 0.000097 m 11 Plot Speer4a 5:26037097 10028670534 liver_Su1
[36 instances listed above]


Correlations with r < 0.5 or p > 0.005 or nstrains < 10 are not retained.

The large number of eligible probeset data instances increases the liklihood of strong mathematical correlations occurring by chance.

[1] DPV = data point variance filter. Stricter settings will omit instances where data points have more variance. To see DPV hover your mouse pointer over the p value.

 




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