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Gene expression >
Probesets correlated to selected phenotype measurement

Your selected phenotype measurement:          
blood — clinical chemistry — glucose         metabolic panel  
Shockley1
GLU_fat   glucose (serum GLU, 5h fast)   [mg/dL]   high-fat diet   4wks
10 strains   age 10-13wks
  Inbred

List correlations where p ≤   and   DPV[1]    
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Mathematical correlation with this phenotype Gene expression probeset data instance
PearsonSexNo. of
Strains		Scatter
plot		 Gene
Collect all 		Approximate
chr loc		 Probeset Data set
r = –0.966   p = 0.000005 m 10 Plot Sft2d3 18:31909346 1453170_at liver_Sho1_baseline
r = –0.962   p = 0.000009 m 10 Plot Rlim X:103977661 1440850_at liver_Sho1_baseline
r = –0.952   p = 0.000021 m 10 Plot 12:86947050 1424913_at liver_Sho1_baseline
r = –0.952   p = 0.000021 f 10 Plot Vmp1 11:86584498 1423722_at liver_Sho2_highfat
r = –0.949   p = 0.000029 m 10 Plot Nfkbib 7:28766981 1423507_a_at liver_Sho2_highfat
r = –0.947   p = 0.000033 f 10 Plot Lamp2 X:38419823 1428094_at liver_Sho1_baseline
r = 0.944   p = 0.000040 m 10 Plot Tnfaip8l1 17:56162577 1449125_at liver_Sho1_baseline
r = 0.944   p = 0.000040 m 10 Plot Hmmr 11:40701498 1450157_a_at liver_Sho1_baseline
r = –0.943   p = 0.000043 m 10 Plot 15:34149245 1458764_at liver_Sho2_highfat
r = –0.937   p = 0.000065 m 10 Plot 17:73804660 1417235_at liver_Sho1_baseline
r = 0.935   p = 0.000072 m 10 Plot 3:89415078 1416698_a_at liver_Sho2_highfat
r = 0.934   p = 0.000075 f 10 Plot Kif5c 2:49629480 1447454_at liver_Sho2_highfat
r = –0.933   p = 0.000079 m 10 Plot Trmt44 5:35557351 1460410_at liver_Sho1_baseline
r = –0.933   p = 0.000081 m 10 Plot Adk 14:21052778 1416319_at liver_Sho1_baseline
r = 0.931   p = 0.000093 m 10 Plot 2:125830264 1437039_at liver_Sho1_baseline
r = 0.929   p = 0.000099 m 10 Plot 2:181864295 1422752_at liver_Sho2_highfat
[16 instances listed above]


Correlations with r < 0.5 or p > 0.005 or nstrains < 10 are not retained.

The large number of eligible probeset data instances increases the liklihood of strong mathematical correlations occurring by chance.

[1] DPV = data point variance filter. Stricter settings will omit instances where data points have more variance. To see DPV hover your mouse pointer over the p value.

 




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