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Probesets correlated to selected phenotype measurement

Your selected phenotype measurement:          
reproduction — fecundity         observation  
Jax5
latency_first_litter   latency to first litter per dam (dam age at first litter minus age at mate)   [wks] 35 strains   age 6-40wks
  Inbred

List correlations where p ≤   and   DPV[1]    
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Mathematical correlation with this phenotype Gene expression probeset data instance
PearsonSexNo. of
Strains		Scatter
plot		 Gene
Collect all 		Approximate
chr loc		 Probeset Data set
r = –0.882   p = 0.000003 f 17 Plot H2-T10 17:36119267 10018179466 liver_Su1
r = –0.862   p = 0.000008 f 17 Plot 2310035C23Rik 1:105708994 10018195722 liver_Su1
r = –0.862   p = 0.000009 f 17 Plot Pygb 2:150809246 10021551358 liver_Su1
r = –0.858   p = 0.000010 f 17 Plot Wasf2 4:133165131 10024407610 liver_Su1
r = –0.856   p = 0.000012 f 17 Plot Capn1 19:6001848 10018187955 liver_Su1
r = 0.849   p = 0.000016 f 17 Plot 4933440J02Rik 10:111590496 10028172107 liver_Su1
r = –0.849   p = 0.000017 f 17 Plot Parn 16:13603059 10018191862 liver_Su1
r = 0.846   p = 0.000018 f 17 Plot Tyw3 3:154587151 10024445458 liver_Su1
r = 0.846   p = 0.000019 f 17 Plot Serp2 14:76544837 10018185518 liver_Su1
r = –0.842   p = 0.000022 f 17 Plot Galnt4 10:99110703 10028669012 liver_Su1
r = –0.840   p = 0.000024 f 17 Plot Rab3b 4:108911193 10018194453 liver_Su1
r = 0.841   p = 0.000024 f 17 Plot Bbs4 9:59337713 10024403374 liver_Su1
r = 0.837   p = 0.000028 f 17 Plot Spice1 16:44367809 10024393367 liver_Su1
r = 0.836   p = 0.000029 f 17 Plot Cecr5 6:120520407 10024403167 liver_Su1
r = –0.836   p = 0.000029 f 17 Plot Olfr99 17:37279960 10028671750 liver_Su1
r = 0.835   p = 0.000030 f 17 Plot Gm20499 5:114815832 10018184906 liver_Su1
r = –0.834   p = 0.000032 f 17 Plot Atg16l2 7:101295822 10018195252 liver_Su1
r = 0.833   p = 0.000033 f 17 Plot Olfr1046 2:86217233 10028669442 liver_Su1
r = 0.828   p = 0.000041 f 17 Plot 2310044K18Rik 7:83660269 10028168272 liver_Su1
r = 0.827   p = 0.000042 f 17 Plot Cox4i1 8:120671248 10018178253 liver_Su1
r = 0.827   p = 0.000042 f 17 Plot 7530422B04Rik 2:153649488 10028171576 liver_Su1
r = 0.827   p = 0.000042 f 17 Plot C79798 2:34295518 10028172486 liver_Su1
r = –0.822   p = 0.000052 f 17 Plot S100a1 3:90512713 10019061715 liver_Su1
r = 0.818   p = 0.000060 f 17 Plot Bsph2 7:13562967 10018187931 liver_Su1
r = –0.818   p = 0.000061 f 17 Plot Esyt1 10:128518053 10019061117 liver_Su1
r = 0.816   p = 0.000066 f 17 Plot 1110006O24Rik 5:115631440 10018188402 liver_Su1
r = 0.811   p = 0.000079 f 17 Plot Nlrp14 7:107182546 10018177823 liver_Su1
r = 0.810   p = 0.000080 f 17 Plot Ccdc19 1:172533457 10024397024 liver_Su1
r = 0.810   p = 0.000081 f 17 Plot Hsd3b6 3:98809974 10024394004 liver_Su1
r = –0.809   p = 0.000085 f 17 Plot Enoph1 5:100054402 10018180440 liver_Su1
r = 0.809   p = 0.000086 f 17 Plot 1700067P10Rik 17:48090276 10018185148 liver_Su1
r = 0.808   p = 0.000088 f 17 Plot Sall4 2:168758137 10018196183 liver_Su1
r = –0.808   p = 0.000088 f 17 Plot Slc12a8 16:33590732 10024406233 liver_Su1
r = –0.807   p = 0.000089 f 17 Plot Prnd 2:131924179 10019059865 liver_Su1
r = 0.807   p = 0.000090 f 17 Plot 4:133910999 10028171043 liver_Su1
r = 0.806   p = 0.000094 f 17 Plot Foxh1 15:76669090 10028673962 liver_Su1
r = 0.806   p = 0.000095 f 17 Plot Slc6a18 13:73669887 10028668899 liver_Su1
r = 0.806   p = 0.000095 f 17 Plot Olfr394 11:73887904 10028670217 liver_Su1
r = 0.804   p = 0.000099 f 17 Plot Fcamr 1:130807821 10028673961 liver_Su1
r = 0.804   p = 0.000100 f 17 Plot Hspe1 1:55089719 10018193557 liver_Su1
[40 instances listed above]


Correlations with r < 0.5 or p > 0.005 or nstrains < 10 are not retained.

The large number of eligible probeset data instances increases the liklihood of strong mathematical correlations occurring by chance.

[1] DPV = data point variance filter. Stricter settings will omit instances where data points have more variance. To see DPV hover your mouse pointer over the p value.

 




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