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Expression probesets correlated to selected phenotype measurement

Your selected phenotype measurement:          
behavior — balance and coordination         rotarod  
Crabbe3
ARR2_chg_20rpm   accelerating rotarod (ARR2) average latency of post-injection trials minus pre-injection trials (ETPOST - ETBASE) (20 rpm/min)   [s]   ethanol 2g/kg i.p. 21 strains   age 9-17wks
  Inbred

List correlations where p ≤   and at least strains in common     DPV[1]    
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Mathematical correlation with phenotype Gene expression probeset instance


Pearson
p valueSexNo. of
Strains
Scatter
plot
Gene
Collect all
Approximate
chr loc
Probeset Data set
-0.934 0.000001 m 14 Plot Cep350 1:155864870 1443945_at brain_Tabakoff1
-0.962 0.000001 m 12 Plot 7:69602917 A_51_P287756 liver_Rusyn4_TCE
-0.955 0.000001 m 12 Plot 11:99867912 A_52_P519324 liver_Rusyn4_TCE
+0.891 0.000002 m 17 Plot BC018507 13:70610605 A_51_P421729 liver_Gatti1
+0.945 0.000004 m 12 Plot Atp5l 9:44920172 A_51_P142450 liver_Rusyn3_ctrl
-0.944 0.000004 m 12 Plot 3:114271657 A_51_P459477 liver_Rusyn3_ctrl
-0.945 0.000004 m 12 Plot Sectm1a 11:121074615 A_51_P114274 liver_Rusyn4_TCE
+0.942 0.000005 m 12 Plot Mllt4 17:13865431 A_52_P329250 liver_Rusyn4_TCE
-0.869 0.000006 m 17 Plot Pcdh9 14:93078564 A_51_P315754 liver_Gatti1
-0.866 0.000007 m 17 Plot Mrpl14 17:45686355 A_51_P297399 liver_Gatti1
+0.862 0.000009 m 17 Plot Btbd9 17:30385153 A_51_P277524 liver_Gatti1
-0.876 0.000009 f 16 Plot Rtel1 2:181338177 10028672338 liver_Su1
-0.932 0.000010 m 12 Plot 8:101542623 A_51_P246924 liver_Rusyn4_TCE
-0.932 0.000010 m 12 Plot 18:37539353 A_51_P257292 liver_Rusyn4_TCE
-0.932 0.000010 m 12 Plot 7:4249993 A_52_P183524 liver_Rusyn4_TCE
+0.854 0.000013 m 17 Plot Ccdc108 1:74930845 A_51_P112821 liver_Gatti1
-0.929 0.000013 m 12 Plot 9:62598773 A_52_P538995 liver_Rusyn4_TCE
-0.851 0.000015 m 17 Plot Cox7b2 5:71533485 A_51_P234535 liver_Gatti1
-0.925 0.000016 m 12 Plot Aak1 6:86973581 A_51_P210340 liver_Rusyn3_ctrl
-0.925 0.000016 m 12 Plot 8:101778172 A_51_P456366 liver_Rusyn3_ctrl
-0.919 0.000024 m 12 Plot 8:101778172 A_51_P456366 liver_Rusyn4_TCE
+0.839 0.000025 m 17 Plot Csnk1d 11:120973944 A_51_P181312 liver_Gatti1
+0.917 0.000026 m 12 Plot Slc8a2 7:16151488 A_51_P183275 liver_Rusyn4_TCE
-0.917 0.000027 m 12 Plot Sectm1a 11:121074615 A_51_P114274 liver_Rusyn3_ctrl
+0.849 0.000031 m 16 Plot Nampt 12:32836041 10018194995 liver_Su1
-0.914 0.000033 m 12 Plot P2rx3 2:85002330 A_51_P116326 liver_Rusyn3_ctrl
-0.913 0.000033 m 12 Plot 13:23037982 A_51_P416509 liver_Rusyn3_ctrl
-0.912 0.000036 m 12 Plot Dscam 16:96753497 A_51_P189943 liver_Rusyn4_TCE
-0.911 0.000038 m 12 Plot Gab1 8:80878685 A_52_P120140 liver_Rusyn3_ctrl
+0.910 0.000040 m 12 Plot Asxl2 12:3429232 A_51_P190869 liver_Rusyn3_ctrl
+0.910 0.000040 m 12 Plot 13:21310142 A_51_P182358 liver_Rusyn4_TCE
+0.909 0.000043 m 12 Plot 7:94284255 A_52_P644072 liver_Rusyn3_ctrl
-0.908 0.000045 m 12 Plot 7:16768605 A_51_P334979 liver_Rusyn4_TCE
+0.825 0.000046 m 17 Plot Kifap3 1:163812919 A_51_P111762 liver_Gatti1
-0.907 0.000048 m 12 Plot Park2 17:11602371 A_51_P443387 liver_Rusyn4_TCE
-0.871 0.000049 m 14 Plot 16:10487907 1421210_at brain_Tabakoff1
-0.906 0.000049 m 12 Plot Hsf2bp 17:31963315 A_52_P41728 liver_Rusyn4_TCE
-0.869 0.000054 m 14 Plot Card6 15:5097000 1436395_at brain_Tabakoff1
+0.820 0.000055 m 17 Plot Ccdc151 9:22000300 A_51_P503654 liver_Gatti1
-0.835 0.000057 m 16 Plot Arhgef17 7:100900953 10024424123 liver_Su1
+0.819 0.000058 m 17 Plot 11:52532342 A_51_P130459 liver_Gatti1
+0.902 0.000059 m 12 Plot 15:10820051 A_52_P470211 liver_Rusyn3_ctrl
+0.817 0.000062 m 17 Plot 6:72456270 A_51_P227826 liver_Gatti1
-0.901 0.000064 m 12 Plot 1:38172226 A_52_P345777 liver_Rusyn4_TCE
-0.814 0.000071 m 17 Plot 5:138538473 A_51_P364231 liver_Gatti1
-0.898 0.000071 m 12 Plot 7:69602917 A_51_P287756 liver_Rusyn3_ctrl
-0.863 0.000072 m 14 Plot 16:17796907 1438406_at brain_Tabakoff1
+0.813 0.000072 m 17 Plot Cacna1a 8:84411652 A_51_P157554 liver_Gatti1
-0.898 0.000072 m 12 Plot Stoml2 4:43030761 A_51_P380685 liver_Rusyn3_ctrl
+0.862 0.000073 m 14 Plot Smap1 1:23849161 1431744_a_at brain_Tabakoff1
-0.827 0.000076 f 16 Plot A630001O12Rik 8:126851043 10028168035 liver_Su1
-0.896 0.000079 m 12 Plot 7:132223501 A_52_P209073 liver_Rusyn3_ctrl
-0.896 0.000079 m 12 Plot Zfp760 17:21711229 A_51_P471362 liver_Rusyn4_TCE
-0.895 0.000083 m 12 Plot 4:147780412 A_52_P36190 liver_Rusyn3_ctrl
-0.824 0.000085 f 16 Plot Crygs 16:22808305 10018174588 liver_Su1
-0.808 0.000087 m 17 Plot Casc4 2:121928246 A_51_P179125 liver_Gatti1
-0.807 0.000090 m 17 Plot Map3k2 18:32179909 A_51_P437302 liver_Gatti1
+0.893 0.000092 m 12 Plot Arf1 11:59222267 A_52_P527400 liver_Rusyn4_TCE
-0.856 0.000093 m 14 Plot Zfp740 15:102215569 1418741_at brain_Tabakoff1
-0.893 0.000093 m 12 Plot 7:95420783 A_51_P289976 liver_Rusyn4_TCE
+0.893 0.000093 m 12 Plot Aoah 13:20996419 A_52_P176361 liver_Rusyn4_TCE
+0.805 0.000095 m 17 Plot Msantd2 9:37506089 A_51_P293307 liver_Gatti1
+0.805 0.000098 m 17 Plot Sox6 7:115733129 A_51_P248725 liver_Gatti1
+0.820 0.000099 f 16 Plot Izumo3 4:92145781 10018182916 liver_Su1


[64 rows]


Correlations with p < 0.001 and nstrains ≥ 12 are computed and saved in advance and this tool retrieves from that table. Alternatively you can compute correlations on-the-fly with more flexibility (but must be 3 or fewer expression data sets). A "number of unique objects examined" summary is available with "on-the-fly" computation.

The large number of eligible probeset data instances increases the liklihood of strong mathematical correlations occurring by chance.

[1] DPV = data point variance filter. Stricter settings will omit instances where data points have more variance amongst animal replicates within a strain/sex group. To see DPV hover your mouse pointer over the p value.
 




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