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Data table downloads

From here you can download entire MPD data tables.
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measurements.csv Metadata for all phenotype strain survey measurements (traits) in MPD. Includes descriptions, units, variable names, and other attributes.

Field descriptions
qtlphenomeas.csv Metadata for all QTL Archive phenotype measurements (traits). Includes descriptions, units, variable names, and other attributes.

Field descriptions
mpd_datasets_metadata.xml.gz An XML representation of the metadata for all data sets in MPD.

Field descriptions
straininfo.csv Strain name, vendor, stock number, and other attributes of each mouse strain with data in MPD. One row per strain.

Field descriptions
datasets_strains.csv Indicates which mouse strains are involved in each data set, in a many-to-many mapping table.

Field descriptions
ontology_mappings.csv Ontology term mappings (MP, VT, MA) for phenotype strain survey measurements as well as all QTL Archive phenotype measurements.

Field descriptions
strainmeans.csv.gz Strain means, SD, SEM, N, CV etc. for all numeric phenotype strain survey measurements (traits) in MPD.

Field descriptions
categodata.csv Strain consensus values for all categorical (non-numeric) phenotype strain survey measurements (traits) in MPD.

Field descriptions
animaldatapoints.csv.gz Individual mouse readings for all phenotype strain survey measurements (traits) in MPD.

Field descriptions
measstats.csv.gz Overall averages (all strains combined), with SD, etc. for each phenotype strain survey measurement in MPD.

Field descriptions
sexdiff.csv.gz Sex differences (female vs. male by strain) for each phenotype strain survey measurement in MPD.

Field descriptions


Other possibilities:

If you wish to download a certain data set, use MPD search to locate the page for that data set, and download from there. If you wish to download data for a certain mouse strain, use MPD search to locate the page for that strain, and download from there.

Other specific downloads can be prepared for you by request at phenome@jax.org, Contact us and let us know what you need.



 




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