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Analysis approaches


    • Tools and views   Web-based tools for plotting, correlations, criteria-fit and finding outliers and exceptional cases.

    • Ontologies   MPD phenotype strain survey data have been mapped to MP, VT, and MA ontology terms. Find phenotype data by ontology term, or navigate the ontologies and term-specific linkouts to other resources.

    • Your collection   While browsing MPD collect phenotype measurements into your shopping cart. Then go to your cart (at top of page) to work with them.

    • Input your strain means and see how they correlate with phenotype and gene expression data in MPD.

    • GWAS study   Genome-wide association studies of selected MPD phenotypes were run by the ZarLab at UCLA using EMMA.

    • Sex differences   Which measured traits have the most amount of difference between females and males? Which have the least?

    • Sampling variation over time   Several studies measured seasonal variation of C57BL/6J mice in various phenotypes.


Gene expression strain surveys

Look up data for one or two strains

    • MPD data by strain or strain panel   Find phenotype, SNP/variation, or gene expression data for a certain strain, or list phenotypes and probesets where a certain strain is a high-end or low-end outlier.

    • Compare two strains   For two strains of interest see how they compare in phenotypes, polymorphisms, and expression.

Data downloads

Our Help Desk is happy to assist you in your work. Let us know how we can help.
Our video demo / tutorial series is also available.


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